Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
1G5S
DownloadVisualize
BU of 1g5s by Molmil
CRYSTAL STRUCTURE OF HUMAN CYCLIN DEPENDENT KINASE 2 (CDK2) IN COMPLEX WITH THE INHIBITOR H717
Descriptor: 2-[TRANS-(4-AMINOCYCLOHEXYL)AMINO]-6-(BENZYL-AMINO)-9-CYCLOPENTYLPURINE, CELL DIVISION PROTEIN KINASE 2
Authors:Dreyer, M.K, Borcherding, D.R, Dumont, J.A, Peet, N.P, Tsay, J.T, Wright, P.S, Bitonti, A.J, Shen, J, Kim, S.-H.
Deposit date:2000-11-02
Release date:2001-11-02
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.61 Å)
Cite:Crystal structure of human cyclin-dependent kinase 2 in complex with the adenine-derived inhibitor H717.
J.Med.Chem., 44, 2001
1LST
DownloadVisualize
BU of 1lst by Molmil
THREE-DIMENSIONAL STRUCTURES OF THE PERIPLASMIC LYSINE-, ARGININE-, ORNITHINE-BINDING PROTEIN WITH AND WITHOUT A LIGAND
Descriptor: LYSINE, ARGININE, ORNITHINE-BINDING PROTEIN
Authors:Kim, S.-H, Oh, B.-H.
Deposit date:1993-02-25
Release date:1994-06-22
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Three-dimensional structures of the periplasmic lysine/arginine/ornithine-binding protein with and without a ligand.
J.Biol.Chem., 268, 1993
1HCK
DownloadVisualize
BU of 1hck by Molmil
HUMAN CYCLIN-DEPENDENT KINASE 2
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, HUMAN CYCLIN-DEPENDENT KINASE 2, MAGNESIUM ION
Authors:Schulze-Gahmen, U, De Bondt, H.L, Kim, S.-H.
Deposit date:1996-06-03
Release date:1996-12-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:High-resolution crystal structures of human cyclin-dependent kinase 2 with and without ATP: bound waters and natural ligand as guides for inhibitor design.
J.Med.Chem., 39, 1996
1HCL
DownloadVisualize
BU of 1hcl by Molmil
HUMAN CYCLIN-DEPENDENT KINASE 2
Descriptor: HUMAN CYCLIN-DEPENDENT KINASE 2
Authors:Schulze-Gahmen, U, De Bondt, H.L, Kim, S.-H.
Deposit date:1996-06-03
Release date:1996-12-07
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:High-resolution crystal structures of human cyclin-dependent kinase 2 with and without ATP: bound waters and natural ligand as guides for inhibitor design.
J.Med.Chem., 39, 1996
1NF2
DownloadVisualize
BU of 1nf2 by Molmil
X-ray crystal structure of TM0651 from Thermotoga maritima
Descriptor: MAGNESIUM ION, SULFATE ION, phosphatase
Authors:Shin, D.H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2002-12-12
Release date:2003-09-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a phosphatase with a unique substrate binding domain from Thermotoga maritima
Protein Sci., 12, 2003
1LAG
DownloadVisualize
BU of 1lag by Molmil
STRUCTURAL BASES FOR MULTIPLE LIGAND SPECIFICITY OF THE PERIPLASMIC LYSINE-, ARGININE-, ORNITHINE-BINDING PROTEIN
Descriptor: HISTIDINE, LYSINE, ARGININE, ...
Authors:Kim, S.-H, Oh, B.-H.
Deposit date:1993-10-06
Release date:1995-07-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structural basis for multiple ligand specificity of the periplasmic lysine-, arginine-, ornithine-binding protein.
J.Biol.Chem., 269, 1994
1LAF
DownloadVisualize
BU of 1laf by Molmil
STRUCTURAL BASES FOR MULTIPLE LIGAND SPECIFICITY OF THE PERIPLASMIC LYSINE-, ARGININE-, ORNITHINE-BINDING PROTEIN
Descriptor: ARGININE, LYSINE, ORNITHINE-BINDING PROTEIN
Authors:Kim, S.-H, Oh, B.-H.
Deposit date:1993-10-06
Release date:1995-07-10
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:Structural basis for multiple ligand specificity of the periplasmic lysine-, arginine-, ornithine-binding protein.
J.Biol.Chem., 269, 1994
2HQB
DownloadVisualize
BU of 2hqb by Molmil
Crystal Structure of a Transcriptional Activator of comK gene from Bacillus halodurans
Descriptor: Transcriptional activator of comK gene
Authors:Xu, Q.S, Berkeley Structural Genomics Center (BSGC)
Deposit date:2006-07-18
Release date:2007-05-29
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal structure of a transcriptional activator of comK gene from Bacillus halodurans.
Proteins, 69, 2007
2HQL
DownloadVisualize
BU of 2hql by Molmil
Crystal structure of a small single-stranded DNA binding protein from Mycoplasma pneumoniae
Descriptor: Hypothetical protein MG376 homolog
Authors:Das, D, Berkeley Structural Genomics Center (BSGC)
Deposit date:2006-07-18
Release date:2007-05-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a novel single-stranded DNA binding protein from Mycoplasma pneumoniae.
Proteins, 67, 2007
3L0V
DownloadVisualize
BU of 3l0v by Molmil
Crystal structure of catalytic domain of TACE with the first hydantoin inhibitor occupying the S1' pocket
Descriptor: (5R)-5-[(5-methoxy-3-oxo-1,3-dihydro-2H-indazol-2-yl)methyl]-5-methylimidazolidine-2,4-dione, Disintegrin and metalloproteinase domain-containing protein 17, ZINC ION
Authors:Orth, P.
Deposit date:2009-12-10
Release date:2010-03-02
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Discovery and SAR of hydantoin TACE inhibitors.
Bioorg.Med.Chem.Lett., 20, 2010
3LEA
DownloadVisualize
BU of 3lea by Molmil
Crystal structure of the catalytic domain of TACE with Isoindolinone-biphenyl-hydantoin inhibitor
Descriptor: 2-{[(4R)-2,5-dioxo-4-(4-pyridin-3-ylphenyl)imidazolidin-4-yl]methyl}-6-methoxy-1-oxo-1H-isoindolium, Disintegrin and metalloproteinase domain-containing protein 17, ISOPROPYL ALCOHOL, ...
Authors:Orth, P.
Deposit date:2010-01-14
Release date:2010-12-08
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Biaryl substituted hydantoin compounds as TACE inhibitors.
Bioorg.Med.Chem.Lett., 20, 2010
3L0T
DownloadVisualize
BU of 3l0t by Molmil
Crystal structure of catalytic domain of TACE with hydantoin inhibitor
Descriptor: Disintegrin and metalloproteinase domain-containing protein 17, ISOPROPYL ALCOHOL, N-{(2R)-2-[2-(hydroxyamino)-2-oxoethyl]-4-methylpentanoyl}-3-methyl-L-valyl-N-(2-aminoethyl)-L-alaninamide, ...
Authors:Orth, P.
Deposit date:2009-12-10
Release date:2010-03-02
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Discovery and SAR of hydantoin TACE inhibitors.
Bioorg.Med.Chem.Lett., 20, 2010
3LE9
DownloadVisualize
BU of 3le9 by Molmil
Crystal structure of the catalytic domain of TACE with Indazolinone-phenyl-hydantoin inhibitor
Descriptor: (5R)-5-[(5-methoxy-3-oxo-1,3-dihydro-2H-indazol-2-yl)methyl]-5-phenylimidazolidine-2,4-dione, Disintegrin and metalloproteinase domain-containing protein 17, ISOPROPYL ALCOHOL, ...
Authors:Orth, P.
Deposit date:2010-01-14
Release date:2010-12-08
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Biaryl substituted hydantoin compounds as TACE inhibitors.
Bioorg.Med.Chem.Lett., 20, 2010
1COJ
DownloadVisualize
BU of 1coj by Molmil
FE-SOD FROM AQUIFEX PYROPHILUS, A HYPERTHERMOPHILIC BACTERIUM
Descriptor: FE (III) ION, PROTEIN (SUPEROXIDE DISMUTASE)
Authors:Lim, J.H, Yu, Y.G, Kim, S.-H, Cho, S.-J, Ahn, B.Y, Han, Y.S, Cho, Y.
Deposit date:1999-05-28
Release date:1999-06-14
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The crystal structure of an Fe-superoxide dismutase from the hyperthermophile Aquifex pyrophilus at 1.9 A resolution: structural basis for thermostability.
J.Mol.Biol., 270, 1997
1FJS
DownloadVisualize
BU of 1fjs by Molmil
CRYSTAL STRUCTURE OF THE INHIBITOR ZK-807834 (CI-1031) COMPLEXED WITH FACTOR XA
Descriptor: CALCIUM ION, CHLORIDE ION, COAGULATION FACTOR XA, ...
Authors:Adler, M, Whitlow, M.
Deposit date:2000-08-08
Release date:2000-10-04
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Preparation, characterization, and the crystal structure of the inhibitor ZK-807834 (CI-1031) complexed with factor Xa.
Biochemistry, 39, 2000
3D1N
DownloadVisualize
BU of 3d1n by Molmil
Structure of human Brn-5 transcription factor in complex with corticotrophin-releasing hormone gene promoter
Descriptor: 5'-D(*DAP*DGP*DCP*DAP*DTP*DAP*DAP*DAP*DTP*DAP*DAP*DTP*DAP*DA)-3', 5'-D(*DTP*DTP*DAP*DTP*DTP*DAP*DTP*DTP*DTP*DAP*DTP*DGP*DCP*DT)-3', POU domain, ...
Authors:Pereira, J.H, Ha, S.C, Kim, S.-H.
Deposit date:2008-05-06
Release date:2009-05-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structure of human Brn-5 transcription factor in complex with CRH gene promoter.
J.Struct.Biol., 167, 2009
9EEZ
DownloadVisualize
BU of 9eez by Molmil
STEP (PTPN5) with active-site disulfide bond and covalent ligand bound to distal C505 and C518
Descriptor: DIMETHYL SULFOXIDE, SULFATE ION, Tyrosine-protein phosphatase non-receptor type 5, ...
Authors:Guerrero, L, Ebrahim, A, Riley, B.T, Keedy, D.A.
Deposit date:2024-11-19
Release date:2024-12-11
Last modified:2025-05-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Three STEPs forward: A trio of unexpected structures of PTPN5.
Biorxiv, 2025
9EEX
DownloadVisualize
BU of 9eex by Molmil
STEP (PTPN5) at high resolution with citrate bound in active site
Descriptor: CITRIC ACID, Tyrosine-protein phosphatase non-receptor type 5
Authors:Guerrero, L, Ebrahim, A, Riley, B.T, Keedy, D.A.
Deposit date:2024-11-19
Release date:2024-12-11
Last modified:2025-05-07
Method:X-RAY DIFFRACTION (1.27 Å)
Cite:Three STEPs forward: A trio of unexpected structures of PTPN5.
Biorxiv, 2025
9EEY
DownloadVisualize
BU of 9eey by Molmil
STEP (PTPN5) with active-site disulfide bond and allosteric-site loop shift
Descriptor: SULFATE ION, Tyrosine-protein phosphatase non-receptor type 5
Authors:Guerrero, L, Ebrahim, A, Riley, B.T, Keedy, D.A.
Deposit date:2024-11-19
Release date:2024-12-11
Last modified:2025-05-07
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Three STEPs forward: A trio of unexpected structures of PTPN5.
Biorxiv, 2025
1ZXJ
DownloadVisualize
BU of 1zxj by Molmil
Crystal structure of the hypthetical Mycoplasma protein, MPN555
Descriptor: Hypothetical protein MG377 homolog
Authors:Schulze-Gahmen, U, Aono, S, Shengfeng, C, Yokota, H, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2005-06-08
Release date:2005-07-26
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of the hypothetical Mycoplasma protein MPN555 suggests a chaperone function.
Acta Crystallogr.,Sect.D, 61, 2005
6A6K
DownloadVisualize
BU of 6a6k by Molmil
Crystal structure of Estrogen-related Receptor-3 (ERR-gamma) ligand binding domain with DN201000
Descriptor: 3-[(~{E})-5-oxidanyl-2-phenyl-1-[4-(4-propan-2-ylpiperazin-1-yl)phenyl]pent-1-enyl]phenol, Estrogen-related receptor gamma
Authors:Yoon, H, Kim, J, Chin, J, Cho, S.J, Song, J.
Deposit date:2018-06-28
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Discovery of Potent, Selective, and Orally Bioavailable Estrogen-Related Receptor-gamma Inverse Agonists To Restore the Sodium Iodide Symporter Function in Anaplastic Thyroid Cancer.
J. Med. Chem., 62, 2019
5EY2
DownloadVisualize
BU of 5ey2 by Molmil
Crystal structure of CodY from Bacillus cereus
Descriptor: GTP-sensing transcriptional pleiotropic repressor CodY
Authors:Han, A, Lee, W.C, Son, J, Kim, S.H, Hwang, K.Y.
Deposit date:2015-11-24
Release date:2016-09-14
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:The structure of the pleiotropic transcription regulator CodY provides insight into its GTP-sensing mechanism
Nucleic Acids Res., 44, 2016
1IM5
DownloadVisualize
BU of 1im5 by Molmil
Crystal Structure of Pyrazinamidase of Pyrococcus horikoshii in Complex with Zinc
Descriptor: 180aa long hypothetical Pyrazinamidase/Nicotinamidase, ZINC ION
Authors:Du, X, Kim, S.-H.
Deposit date:2001-05-09
Release date:2001-12-12
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure and mechanism of catalysis of a pyrazinamidase from Pyrococcus horikoshii.
Biochemistry, 40, 2001
1STZ
DownloadVisualize
BU of 1stz by Molmil
Crystal structure of a hypothetical protein at 2.2 A resolution
Descriptor: Heat-inducible transcription repressor hrcA homolog
Authors:Liu, J, Adams, P.D, Shin, D.-H, Huang, C, Yokota, H, Jancarik, J, Kim, R, Kim, S.-H, Berkeley Structural Genomics Center (BSGC)
Deposit date:2004-03-25
Release date:2004-08-24
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of a heat-inducible transcriptional repressor HrcA from Thermotoga maritima: structural insight into DNA binding and dimerization.
J.Mol.Biol., 350, 2005
1YED
DownloadVisualize
BU of 1yed by Molmil
STRUCTURE OF A CATALYTIC ANTIBODY IGG2A FAB FRAGMENT (D2.4)
Descriptor: 4-NITRO-BENZYLPHOSPHONOBUTANOYL-GLYCINE, IGG1 FAB FRAGMENT (D.2.4)
Authors:Golinelli-Pimpaneau, B, Knossow, M.
Deposit date:1997-04-15
Release date:1997-10-15
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural convergence in the active sites of a family of catalytic antibodies.
Science, 275, 1997

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon