Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2J63
DownloadVisualize
BU of 2j63 by Molmil
Crystal structure of AP endonuclease LMAP from Leishmania major
Descriptor: AP-ENDONUCLEASE
Authors:Vidal, A.E, Harkiolaki, M, Gallego, C, Castillo-Acosta, V.M, Ruiz-Perez, L.M, Wilson, K.S, Gonzalez-Pacanowska, D.
Deposit date:2006-09-25
Release date:2007-08-28
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.48 Å)
Cite:Crystal Structure and DNA Repair Activities of the Ap Endonuclease from Leishmania Major.
J.Mol.Biol., 373, 2007
5MMZ
DownloadVisualize
BU of 5mmz by Molmil
Structure of PRL-1 in complex with the Bateman domain of CNNM2
Descriptor: Metal transporter CNNM2, Protein tyrosine phosphatase type IVA 1
Authors:Gimenez-Mascarell, P, Oyenarte, I, Hardy, S, Breiderhoff, T, Stuiver, M, Kostantin, E, Diercks, T, Pey, A.L, Ereno-Orbea, J, Martinez-Chantar, M.L, Khalaf-Nazzal, R, Claverie-Martin, F, Muller, D, Tremblay, M.L, Martinez-Cruz, L.A.
Deposit date:2016-12-12
Release date:2016-12-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural Basis of the Oncogenic Interaction of Phosphatase PRL-1 with the Magnesium Transporter CNNM2.
J. Biol. Chem., 292, 2017
5MN4
DownloadVisualize
BU of 5mn4 by Molmil
S. aureus FtsZ 12-316 F138A GDP Open form (1FOf)
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Cell division protein FtsZ, GUANOSINE-5'-DIPHOSPHATE
Authors:Wagstaff, J.M, Tsim, M, Kureisaite-Ciziene, D, Lowe, J.
Deposit date:2016-12-12
Release date:2016-12-21
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:A Polymerization-Associated Structural Switch in FtsZ That Enables Treadmilling of Model Filaments.
MBio, 8, 2017
6SZ3
DownloadVisualize
BU of 6sz3 by Molmil
Crystal structure of YTHDC1 with fragment 4 (DHU_DC1_158)
Descriptor: SULFATE ION, YTH domain-containing protein 1, ~{N}-methyl-5,6,7,8-tetrahydroquinolin-4-amine
Authors:Bedi, R.K, Huang, D, Sledz, P, Caflisch, A.
Deposit date:2019-10-01
Release date:2020-03-04
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Selectively Disrupting m6A-Dependent Protein-RNA Interactions with Fragments.
Acs Chem.Biol., 15, 2020
3TEM
DownloadVisualize
BU of 3tem by Molmil
Quinone Oxidoreductase (NQ02) bound to the imidazoacridin-6-one 6a1
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, IMIDAZOLE, Ribosyldihydronicotinamide dehydrogenase [quinone], ...
Authors:Dunstan, M.S, Leys, D.
Deposit date:2011-08-15
Release date:2011-09-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Novel Inhibitors of NRH:Quinone Oxidoreductase 2 (NQO2): Crystal Structures, Biochemical Activity, and Intracellular Effects of Imidazoacridin-6-ones.
J.Med.Chem., 54, 2011
1OUX
DownloadVisualize
BU of 1oux by Molmil
LecB (PA-LII) sugar-free
Descriptor: CALCIUM ION, SULFATE ION, hypothetical protein LecB
Authors:Loris, R, Tielker, D, Jaeger, K.-E, Wyns, L.
Deposit date:2003-03-25
Release date:2003-09-09
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural Basis of Carbohydrate Recognition by the Lectin LecB from Pseudomonas aeruginosa
J.MOL.BIOL., 331, 2003
2IC5
DownloadVisualize
BU of 2ic5 by Molmil
Crystal structure of human RAC3 grown in the presence of Gpp(NH)p.
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Ugochukwu, E, Yang, X, Zao, Y, Elkins, J, Gileadi, C, Burgess, N, Colebrook, S, Gileadi, O, Fedorov, O, Bunkoczi, G, Sundstrom, M, Arrowsmith, C, Weigelt, J, Edwards, A, von Delft, F, Doyle, D, Structural Genomics Consortium (SGC)
Deposit date:2006-09-12
Release date:2006-10-10
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of human RAC3 grown in the presence of Gpp(NH)p.
To be Published
2ICS
DownloadVisualize
BU of 2ics by Molmil
Crystal structure of an adenine deaminase
Descriptor: ADENINE, Adenine Deaminase, ZINC ION
Authors:Sugadev, R, Kumaran, D, Burley, S.K, Swaminathan, S, New York SGX Research Center for Structural Genomics (NYSGXRC)
Deposit date:2006-09-13
Release date:2006-10-17
Last modified:2021-02-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of an adenine deaminase
TO BE PUBLISHED
2IO2
DownloadVisualize
BU of 2io2 by Molmil
Crystal structure of human Senp2 in complex with RanGAP1-SUMO-1
Descriptor: Ran GTPase-activating protein 1, Sentrin-specific protease 2, Small ubiquitin-related modifier 1
Authors:Reverter, D, Lima, C.D.
Deposit date:2006-10-09
Release date:2006-11-21
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural basis for SENP2 protease interactions with SUMO precursors and conjugated substrates.
Nat.Struct.Mol.Biol., 13, 2006
6T1H
DownloadVisualize
BU of 6t1h by Molmil
OXA-51-like beta-lactamase OXA-66
Descriptor: Beta-lactamase OXA-66, ZINC ION
Authors:Takebayashi, Y, Chirgadze, D, Henderson, S, Warburton, P.J, Evans, B.E.
Deposit date:2019-10-04
Release date:2020-10-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structure of the OXA-51-like beta-lactamase OXA-66
To Be Published
5MA3
DownloadVisualize
BU of 5ma3 by Molmil
GFP-binding DARPin fusion gc_R11
Descriptor: 1,2-ETHANEDIOL, Green fluorescent protein, R11
Authors:Hansen, S, Stueber, J, Ernst, P, Bojar, D, Batyuk, A, Plueckthun, A.
Deposit date:2016-11-03
Release date:2017-11-08
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Design and applications of a clamp for Green Fluorescent Protein with picomolar affinity.
Sci Rep, 7, 2017
1P2Y
DownloadVisualize
BU of 1p2y by Molmil
CRYSTAL STRUCTURE OF CYTOCHROME P450CAM IN COMPLEX WITH (S)-(-)-NICOTINE
Descriptor: (S)-3-(1-METHYLPYRROLIDIN-2-YL)PYRIDINE, Cytochrome P450-cam, PROTOPORPHYRIN IX CONTAINING FE
Authors:Strickler, M, Goldstein, B.M, Maxfield, K, Shireman, L, Kim, G, Matteson, D, Jones, J.P.
Deposit date:2003-04-16
Release date:2003-10-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystallographic Studies on the Complex Behavior of Nicotine Binding to P450cam (CYP101)(dagger).
Biochemistry, 42, 2003
5MA5
DownloadVisualize
BU of 5ma5 by Molmil
GFP-binding DARPin fusion gc_K11
Descriptor: 1,2-ETHANEDIOL, CITRIC ACID, Green fluorescent protein, ...
Authors:Hansen, S, Stueber, J, Ernst, P, Koch, A, Bojar, D, Batyuk, A, Plueckthun, A.
Deposit date:2016-11-03
Release date:2017-11-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Design and applications of a clamp for Green Fluorescent Protein with picomolar affinity.
Sci Rep, 7, 2017
1P92
DownloadVisualize
BU of 1p92 by Molmil
Crystal Structure of (H79A)DtxR
Descriptor: BETA-MERCAPTOETHANOL, Diphtheria toxin repressor
Authors:D'Aquino, J.A, Ringe, D.
Deposit date:2003-05-08
Release date:2004-05-25
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Determinants of the SRC homology domain 3-like fold.
J.Bacteriol., 185, 2003
1P5F
DownloadVisualize
BU of 1p5f by Molmil
Crystal Structure of Human DJ-1
Descriptor: RNA-binding protein regulatory subunit
Authors:Wilson, M.A, Collins, J.L, Hod, Y, Ringe, D, Petsko, G.A.
Deposit date:2003-04-26
Release date:2003-08-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:The 1.1 A resolution crystal structure of DJ-1, the protein mutated in autosomal recessive early onset Parkinson's disease
Proc.Natl.Acad.Sci.USA, 100, 2003
3TFB
DownloadVisualize
BU of 3tfb by Molmil
Transthyretin natural mutant A25T
Descriptor: Transthyretin
Authors:Azevedo, E.P.C, Pereira, H.M, Garratt, R.C, Kelly, J.W, Foguel, D, Palhano, F.L.
Deposit date:2011-08-15
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.033 Å)
Cite:Dissecting the Structure, Thermodynamic Stability, and Aggregation Properties of the A25T Transthyretin (A25T-TTR) Variant Involved in Leptomeningeal Amyloidosis: Identifying Protein Partners That Co-Aggregate during A25T-TTR Fibrillogenesis in Cerebrospinal Fluid.
Biochemistry, 50, 2011
6T1M
DownloadVisualize
BU of 6t1m by Molmil
Crystal structure of MLLT1 (ENL) YEATS domain in complexed with benzimidazole-amide derivative 4
Descriptor: 1,2-ETHANEDIOL, 4-cyano-~{N}-[2-(piperidin-1-ylmethyl)-1~{H}-benzimidazol-5-yl]benzamide, Protein ENL
Authors:Chaikuad, A, Heidenreich, D, Moustakim, M, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Fedorov, O, Brennan, P.E, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2019-10-04
Release date:2019-11-06
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structural Insights into Interaction Mechanisms of Alternative Piperazine-urea YEATS Domain Binders in MLLT1.
Acs Med.Chem.Lett., 10, 2019
1OND
DownloadVisualize
BU of 1ond by Molmil
THE CRYSTAL STRUCTURE OF THE 50S LARGE RIBOSOMAL SUBUNIT FROM DEINOCOCCUS RADIODURANS COMPLEXED WITH TROLEANDOMYCIN MACROLIDE ANTIBIOTIC
Descriptor: 23S RIBOSOMAL RNA, 50S ribosomal protein L22, 50S ribosomal protein L32, ...
Authors:Berisio, R, Schluenzen, F, Harms, J, Bashan, A, Auerbach, T, Baram, D, Yonath, A.
Deposit date:2003-02-27
Release date:2003-04-15
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (3.4 Å)
Cite:Structural insight into the role of the ribosomal tunnel in cellular regulation
Nat.Struct.Biol., 10, 2003
5N67
DownloadVisualize
BU of 5n67 by Molmil
Crystal Structure of p38alpha in Complex with Lipid Pocket Ligand 9l
Descriptor: 1-[4-[4-[7-azanyl-4-(2-phenylethylamino)quinazolin-2-yl]phenyl]piperazin-1-yl]ethanone, Mitogen-activated protein kinase 14
Authors:Buehrmann, M, Mueller, M.P, Rauh, D.
Deposit date:2017-02-14
Release date:2017-09-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-based design, synthesis and crystallization of 2-arylquinazolines as lipid pocket ligands of p38 alpha MAPK.
PLoS ONE, 12, 2017
5N6G
DownloadVisualize
BU of 5n6g by Molmil
NerA from Agrobacterium radiobacter in complex with 2-phenylacrylic acid
Descriptor: 2-Phenylacrylic acid, ACETATE ION, FLAVIN MONONUCLEOTIDE, ...
Authors:Karuppiah, V, Toogood, H.S, Leys, D, Scrutton, N.S.
Deposit date:2017-02-15
Release date:2017-05-17
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Structural insights into the ene-reductase synthesis of profens.
Org. Biomol. Chem., 15, 2017
1OT8
DownloadVisualize
BU of 1ot8 by Molmil
Structure of the Ankyrin Domain of the Drosophila Notch Receptor
Descriptor: MAGNESIUM ION, Neurogenic locus Notch protein
Authors:Zweifel, M.E, Leahy, D.J, Hughson, F.M, Barrick, D.
Deposit date:2003-03-21
Release date:2003-10-28
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure and stability of the ankyrin domain of the Drosophila Notch receptor
Protein Sci., 12, 2003
6T3B
DownloadVisualize
BU of 6t3b by Molmil
Crystal structure of PI3Kgamma with a dihydropurinone inhibitor (compound 4)
Descriptor: 2-[(4-methoxy-2-methyl-phenyl)amino]-7-methyl-9-(4-oxidanylcyclohexyl)purin-8-one, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform
Authors:Petersen, J, Oster, L, Schimpl, M, Goldberg, F.W, Finlay, M.R.V, Ting, A.K.T, Beattie, D, Lamont, G.M, Fallan, C, Wrigley, G.L, Howard, M.R, Williamson, B, Davies, B.R, Cadogan, E.B, Ramos-Montoya, A, Dean, E.
Deposit date:2019-10-10
Release date:2020-01-01
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:The Discovery of 7-Methyl-2-[(7-methyl[1,2,4]triazolo[1,5-a]pyridin-6-yl)amino]-9-(tetrahydro-2H-pyran-4-yl)-7,9-dihydro-8H-purin-8-one (AZD7648), a Potent and Selective DNA-Dependent Protein Kinase (DNA-PK) Inhibitor.
J.Med.Chem., 63, 2020
1OVE
DownloadVisualize
BU of 1ove by Molmil
The structure of p38 alpha in complex with a dihydroquinolinone
Descriptor: 1-(2,6-DICHLOROPHENYL)-5-(2,4-DIFLUOROPHENYL)-7-PIPERIDIN-4-YL-3,4-DIHYDROQUINOLIN-2(1H)-ONE, GLYCEROL, Mitogen-activated protein kinase 14
Authors:Fitzgerald, C.E, Patel, S.B, Becker, J.W, Cameron, P.M, Zaller, D, Pikounis, V.B, O'Keefe, S.J, Scapin, G.
Deposit date:2003-03-26
Release date:2003-09-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for p38alpha MAP kinase quinazolinone and pyridol-pyrimidine inhibitor specificity
Nat.Struct.Biol., 10, 2003
2IEF
DownloadVisualize
BU of 2ief by Molmil
Structure of the cooperative Excisionase (Xis)-DNA complex reveals a micronucleoprotein filament
Descriptor: 15-mer DNA, 19-mer DNA, 34-mer DNA, ...
Authors:Abbani, M.A, Papagiannis, C.V, Sam, M.D, Cascio, D, Johnson, R.C, Clubb, R.T.
Deposit date:2006-09-18
Release date:2007-02-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.601 Å)
Cite:Structure of the cooperative Xis-DNA complex reveals a micronucleoprotein filament that regulates phage lambda intasome assembly.
Proc.Natl.Acad.Sci.Usa, 104, 2007
1OUK
DownloadVisualize
BU of 1ouk by Molmil
The structure of p38 alpha in complex with a pyridinylimidazole inhibitor
Descriptor: 4-[5-[2-(1-PHENYL-ETHYLAMINO)-PYRIMIDIN-4-YL]-1-METHYL-4-(3-TRIFLUOROMETHYLPHENYL)-1H-IMIDAZOL-2-YL]-PIPERIDINE, Mitogen-activated protein kinase 14, SULFATE ION
Authors:Fitzgerald, C.E, Patel, S.B, Becker, J.W, Cameron, P.M, Zaller, D, Pikounis, V.B, O'Keefe, S.J, Scapin, G.
Deposit date:2003-03-24
Release date:2003-09-02
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for p38alpha MAP kinase quinazolinone and pyridol-pyrimidine inhibitor specificity
Nat.Struct.Biol., 10, 2003

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon