Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5WZK
DownloadVisualize
BU of 5wzk by Molmil
Structure of APUM23-deletion-of-insert-region-GGAAUUGACGG
Descriptor: Pumilio homolog 23, RNA (5'-R(*GP*GP*AP*AP*UP*UP*GP*AP*CP*GP*G)-3')
Authors:Bao, H, Wang, N, Wang, C, Jiang, Y, Wu, J, Shi, Y.
Deposit date:2017-01-18
Release date:2017-09-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural basis for the specific recognition of 18S rRNA by APUM23.
Nucleic Acids Res., 45, 2017
5WZJ
DownloadVisualize
BU of 5wzj by Molmil
Structure of APUM23-GGAUUUGACGG
Descriptor: Pumilio homolog 23, RNA (5'-R(*GP*GP*AP*UP*UP*UP*GP*AP*CP*GP*G)-3')
Authors:Bao, H, Wang, N, Wang, C, Jiang, Y, Wu, J, Shi, Y.
Deposit date:2017-01-18
Release date:2017-09-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.101 Å)
Cite:Structural basis for the specific recognition of 18S rRNA by APUM23.
Nucleic Acids Res., 45, 2017
9KND
DownloadVisualize
BU of 9knd by Molmil
Crystal structure of human ERRg LBD in complex with indole
Descriptor: Estrogen-related receptor gamma, INDOLE, Nuclear receptor-interacting protein 1
Authors:Xu, T, Wang, N, Liu, J.
Deposit date:2024-11-18
Release date:2025-04-16
Last modified:2025-04-23
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Identification of indoles as potential endogenous ligands of ERR gamma and their modulation on drug binding.
Acta Pharmacol.Sin., 2025
9KNE
DownloadVisualize
BU of 9kne by Molmil
Crystal structure of human ERRg LBD in complex with 5-nitroindole
Descriptor: 5-nitro-1H-indole, Estrogen-related receptor gamma, Nuclear receptor-interacting protein 1, ...
Authors:Xu, T, Wang, N, Liu, J.
Deposit date:2024-11-18
Release date:2025-04-16
Last modified:2025-04-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Identification of indoles as potential endogenous ligands of ERR gamma and their modulation on drug binding.
Acta Pharmacol.Sin., 2025
9KNC
DownloadVisualize
BU of 9knc by Molmil
Crystal structure of human ERRg LBD in complex with 6-nitroindole
Descriptor: 6-nitro-1~{H}-indole, Estrogen-related receptor gamma, Nuclear receptor-interacting protein 1, ...
Authors:Xu, T, Wang, N, Liu, J.
Deposit date:2024-11-18
Release date:2025-04-16
Last modified:2025-04-23
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Identification of indoles as potential endogenous ligands of ERR gamma and their modulation on drug binding.
Acta Pharmacol.Sin., 2025
9KNG
DownloadVisualize
BU of 9kng by Molmil
Crystal structure of human ERRg LBD in complex with 4034496
Descriptor: 6-methyl-1,3-benzothiazole-2,4-diamine, Estrogen-related receptor gamma, Nuclear receptor-interacting protein 1
Authors:Xu, T, Wang, N, Liu, J.
Deposit date:2024-11-18
Release date:2025-04-16
Last modified:2025-04-23
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Identification of indoles as potential endogenous ligands of ERR gamma and their modulation on drug binding.
Acta Pharmacol.Sin., 2025
9KNF
DownloadVisualize
BU of 9knf by Molmil
Crystal structure of human ERRg LBD in complex with 4028691
Descriptor: 5-chloranyl-2~{H}-indazole, Estrogen-related receptor gamma, Nuclear receptor-interacting protein 1
Authors:Xu, T, Wang, N, Liu, J.
Deposit date:2024-11-18
Release date:2025-04-16
Last modified:2025-04-23
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Identification of indoles as potential endogenous ligands of ERR gamma and their modulation on drug binding.
Acta Pharmacol.Sin., 2025
5ZUD
DownloadVisualize
BU of 5zud by Molmil
Fit R10 Fab coordinates into the cryo-EM of EV71 in complex with D6
Descriptor: Capsid protein VP1, R10 ANTIBODY HEAVY CHAIN, R10 ANTIBODY LIGHT CHAIN, ...
Authors:Wang, X, Zhu, L, Wang, N.
Deposit date:2018-05-07
Release date:2019-12-25
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.9 Å)
Cite:Neutralization Mechanisms of Two Highly Potent Antibodies against Human Enterovirus 71.
Mbio, 9, 2018
5ZUF
DownloadVisualize
BU of 5zuf by Molmil
Fit R10 Fab coordinates into the cryo-EM of EV71 in complex with A9
Descriptor: Capsid protein VP1, R10 ANTIBODY HEAVY CHAIN, R10 ANTIBODY LIGHT CHAIN, ...
Authors:Wang, X, Zhu, L, Wang, N.
Deposit date:2018-05-07
Release date:2019-12-25
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (6.8 Å)
Cite:Neutralization Mechanisms of Two Highly Potent Antibodies against Human Enterovirus 71.
Mbio, 9, 2018
7YLO
DownloadVisualize
BU of 7ylo by Molmil
Conversion of indole-3-acetic acid into indole-3-aldehyde in bacteria Metabolic network of tryptophan around the indole-3-aldehyde formation
Descriptor: Dyp-type peroxidase, PROTOPORPHYRIN IX CONTAINING FE
Authors:Cheng, J, Luo, Y, Zhu, J, Tan, R, Wang, N, Lebedev, A.A.
Deposit date:2022-07-26
Release date:2023-07-05
Last modified:2025-01-22
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Molecular Insights into the One-Carbon Loss Oxidation of Indole-3-acetic Acid
Acs Catalysis, 14, 2024
5YWP
DownloadVisualize
BU of 5ywp by Molmil
JEV-2H4 Fab complex
Descriptor: 2H4 heavy chain, 2H4 light chain, JEV E protein, ...
Authors:Qiu, X.D, Lei, Y.F, Yang, P, Gao, Q, WANG, N, Cao, L, Yuan, S, Wang, X.X, Xu, Z.K, Rao, Z.H.
Deposit date:2017-11-29
Release date:2018-05-02
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (4.6 Å)
Cite:Structural basis for neutralization of Japanese encephalitis virus by two potent therapeutic antibodies
Nat Microbiol, 3, 2018
4FWI
DownloadVisualize
BU of 4fwi by Molmil
Crystal structure of the nucleotide-binding domain of a dipeptide ABC transporter
Descriptor: ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component, ADENOSINE-5'-TRIPHOSPHATE, ...
Authors:Li, X, Ge, J, Yang, M, Wang, N.
Deposit date:2012-07-01
Release date:2013-01-30
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.892 Å)
Cite:Structure of the nucleotide-binding domain of a dipeptide ABC transporter reveals a novel iron-sulfur cluster-binding domain
Acta Crystallogr.,Sect.D, 69, 2013
7CAB
DownloadVisualize
BU of 7cab by Molmil
Structural basis for neutralization of SARS-CoV-2 and SARS-CoV by a potent therapeutic antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Zhe, L, Cao, L, Deng, Y, Sun, Y, Wang, N, Xie, L, Wang, Y, Rao, Z, Qin, C, Wang, X.
Deposit date:2020-06-08
Release date:2020-12-16
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.52 Å)
Cite:Structural basis for neutralization of SARS-CoV-2 and SARS-CoV by a potent therapeutic antibody.
Science, 369, 2020
5YWO
DownloadVisualize
BU of 5ywo by Molmil
Structure of JEV-2F2 Fab complex
Descriptor: 2F2 heavy chain, 2F2 light chain, JEV E protein, ...
Authors:Qiu, X, Lei, Y.F, Yang, P, Gao, Q, Wang, N, Cao, L, Yuan, S, Wang, X, Xu, Z.K, Rao, Z.
Deposit date:2017-11-29
Release date:2018-03-21
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Structural basis for neutralization of Japanese encephalitis virus by two potent therapeutic antibodies
Nat Microbiol, 3, 2018
5YWF
DownloadVisualize
BU of 5ywf by Molmil
Crystal structure of 2H4 Fab
Descriptor: 2H4 heavy chain, 2H4 light chain
Authors:Qiu, X, Lei, Y, Yang, P, Gao, Q, Wang, N, Cao, L, Wang, X, Xu, Z.K, Rao, Z.
Deposit date:2017-11-29
Release date:2018-03-21
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.206 Å)
Cite:Structural basis for neutralization of Japanese encephalitis virus by two potent therapeutic antibodies
Nat Microbiol, 3, 2018
7CAC
DownloadVisualize
BU of 7cac by Molmil
SARS-CoV-2 S trimer with one RBD in the open state and complexed with one H014 Fab.
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of H014 Fab, ...
Authors:Zhe, L, Cao, L, Deng, Y, Sun, Y, Wang, N, Xie, L, Wang, Y, Rao, Z, Qin, C, Wang, X.
Deposit date:2020-06-08
Release date:2021-02-24
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.55 Å)
Cite:Structural basis for neutralization of SARS-CoV-2 and SARS-CoV by a potent therapeutic antibody.
Science, 369, 2020
7CAI
DownloadVisualize
BU of 7cai by Molmil
SARS-CoV-2 S trimer with two RBDs in the open state and complexed with two H014 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of H014 Fab, ...
Authors:Zhe, L, Cao, L, Deng, Y, Sun, Y, Wang, N, Xie, L, Wang, Y, Rao, Z, Qin, C, Wang, X.
Deposit date:2020-06-08
Release date:2020-09-23
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Structural basis for neutralization of SARS-CoV-2 and SARS-CoV by a potent therapeutic antibody.
Science, 369, 2020
7CAH
DownloadVisualize
BU of 7cah by Molmil
The interface of H014 Fab binds to SARS-CoV-2 S
Descriptor: Heavy chain of H014 Fab, Light chain of H014 Fab, Spike protein S1
Authors:Zhe, L, Cao, L, Deng, Y, Sun, Y, Wang, N, Xie, L, Rao, Z, wang, Y, Qin, C, Wang, X.
Deposit date:2020-06-08
Release date:2020-08-12
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Structural basis for neutralization of SARS-CoV-2 and SARS-CoV by a potent therapeutic antibody.
Science, 369, 2020
7CAK
DownloadVisualize
BU of 7cak by Molmil
SARS-CoV-2 S trimer with three RBD in the open state and complexed with three H014 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of H014 Fab, ...
Authors:Zhe, L, Cao, L, Deng, Y, Sun, Y, Wang, N, Xie, L, Wang, Y, Rao, Z, Qin, C, Wang, X.
Deposit date:2020-06-08
Release date:2020-09-23
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.58 Å)
Cite:Structural basis for neutralization of SARS-CoV-2 and SARS-CoV by a potent therapeutic antibody.
Science, 369, 2020
8ILB
DownloadVisualize
BU of 8ilb by Molmil
The complexes of RbcL, AtRaf1 and AtBSD2 (LFB)
Descriptor: Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, Ribulose bisphosphate carboxylase large chain, ...
Authors:Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R.
Deposit date:2023-03-03
Release date:2023-11-01
Last modified:2023-12-20
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly.
Mol Plant, 16, 2023
8IOJ
DownloadVisualize
BU of 8ioj by Molmil
The Rubisco assembly intermidiate of Rubisco large subunit (RbcL) and Arabidopsis thaliana Rubisco accumulation factor 1 (AtRaf1)
Descriptor: Ribulose bisphosphate carboxylase large chain, Rubisco accumulation factor 1.2, chloroplastic
Authors:Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R.
Deposit date:2023-03-11
Release date:2023-11-01
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (4.1 Å)
Cite:Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly.
Mol Plant, 16, 2023
8ILM
DownloadVisualize
BU of 8ilm by Molmil
The cryo-EM structure of eight Rubisco large subunits (RbcL), two Arabidopsis thaliana Rubisco accumulation factors 1 (AtRaf1), and seven Arabidopsis thaliana Bundle Sheath Defective 2 (AtBSD2)
Descriptor: Protein BUNDLE SHEATH DEFECTIVE 2, chloroplastic, Ribulose bisphosphate carboxylase large chain, ...
Authors:Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R.
Deposit date:2023-03-03
Release date:2023-11-01
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly.
Mol Plant, 16, 2023
8IOL
DownloadVisualize
BU of 8iol by Molmil
The complex of Rubisco large subunit (RbcL)
Descriptor: Ribulose bisphosphate carboxylase large chain
Authors:Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R.
Deposit date:2023-03-11
Release date:2023-11-01
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly.
Mol Plant, 16, 2023
8IO2
DownloadVisualize
BU of 8io2 by Molmil
The Rubisco assembly intermidate of Arabidopsis thaliana Rubisco accumulation factor 1 (AtRaf1) and Rubisco large subunit (RbcL)
Descriptor: Ribulose bisphosphate carboxylase large chain, Rubisco accumulation factor 1.2, chloroplastic
Authors:Wang, R, Song, H, Zhang, W, Wang, N, Zhang, S, Shao, R.
Deposit date:2023-03-10
Release date:2023-11-01
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural insights into the functions of Raf1 and Bsd2 in hexadecameric Rubisco assembly.
Mol Plant, 16, 2023
7CWL
DownloadVisualize
BU of 7cwl by Molmil
SARS-CoV-2 spike protein and P17 fab complex with one RBD in close state
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab P17 heavy chain, Fab P17 light chain, ...
Authors:Wang, X, Wang, N.
Deposit date:2020-08-29
Release date:2021-01-27
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Rational development of a human antibody cocktail that deploys multiple functions to confer Pan-SARS-CoVs protection.
Cell Res., 31, 2021

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon