Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
7ABA
DownloadVisualize
BU of 7aba by Molmil
The structure of the Bottromycin biosynthetic protein SalCYP
Descriptor: HEME C, SalCYP
Authors:Adam, S, Koehnke, J.
Deposit date:2020-09-07
Release date:2020-12-02
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.85002315 Å)
Cite:Characterization of the Stereoselective P450 Enzyme BotCYP Enables the In Vitro Biosynthesis of the Bottromycin Core Scaffold.
J.Am.Chem.Soc., 142, 2020
7ABB
DownloadVisualize
BU of 7abb by Molmil
The truncated structure of the Bottromycin biosynthetic protein SalCYP
Descriptor: HEME C, SalCYP truncation
Authors:Adam, S, Koehnke, J.
Deposit date:2020-09-07
Release date:2020-12-02
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.50004339 Å)
Cite:Characterization of the Stereoselective P450 Enzyme BotCYP Enables the In Vitro Biosynthesis of the Bottromycin Core Scaffold.
J.Am.Chem.Soc., 142, 2020
8AHD
DownloadVisualize
BU of 8ahd by Molmil
The apo structure of the Corramycin phosphotransferase
Descriptor: Corramycin phosphotransferase, GLYCEROL
Authors:Adam, S, Mueller, R, Koehnke, J.
Deposit date:2022-07-21
Release date:2023-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The apo structure of the Corramycin phosphotransferase
To Be Published
8AGY
DownloadVisualize
BU of 8agy by Molmil
The Corramycin phosphotransferase in complex with Corramycin
Descriptor: ABCD, Corramycin phosphotransferase, GLYCEROL
Authors:Adam, S, Mueller, R, Koehnke, J.
Deposit date:2022-07-20
Release date:2023-08-16
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Corramycin phosphotransferase in complex with Corramycin
To Be Published
5M9N
DownloadVisualize
BU of 5m9n by Molmil
Crystal structure of human TDRD1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide
Descriptor: 1,2-ETHANEDIOL, E2F peptide, N3, ...
Authors:Tallant, C, Savitsky, P, Moehlenbrink, J, Chan, C, Nunez-Alonso, G, Newman, J.A, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Fedorov, O, La Thangue, N.B, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2016-11-01
Release date:2016-11-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of human TDRD1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide
To Be Published
5M9O
DownloadVisualize
BU of 5m9o by Molmil
Crystal structure of human SND1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide
Descriptor: E2F peptide, Staphylococcal nuclease domain-containing protein 1
Authors:Tallant, C, Savitsky, P, Moehlenbrink, J, Chan, C, Nunez-Alonso, G, Siejka, P, Sorrell, F.J, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Fedorov, O, La Thangue, N.B, Knapp, S, Structural Genomics Consortium (SGC)
Deposit date:2016-11-01
Release date:2016-12-07
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of human SND1 extended Tudor domain in complex with a symmetrically dimethylated E2F peptide
To Be Published
8PKZ
DownloadVisualize
BU of 8pkz by Molmil
NMR solution structure of PilF-GSPIIB in the c-di-GMP bound state
Descriptor: ATP-binding motif-containing protein pilF, GUANOSINE-5'-MONOPHOSPHATE
Authors:Neissner, K, Woehnert, J.
Deposit date:2023-06-27
Release date:2024-07-10
Method:SOLUTION NMR
Cite:NMR solution structure of GSPIIB of Thermus thermophilus in the c-di-GMP bound state
To Be Published
6I86
DownloadVisualize
BU of 6i86 by Molmil
Crocagin biosynthetic gene J
Descriptor: GLYCEROL, Uncharacterized protein
Authors:Adam, S, Koehnke, J.
Deposit date:2018-11-19
Release date:2019-03-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structure of CgnJ, a domain of unknown function protein from the crocagin gene cluster.
Acta Crystallogr.,Sect.F, 75, 2019
2X5N
DownloadVisualize
BU of 2x5n by Molmil
Crystal Structure of the SpRpn10 VWA domain
Descriptor: 26S PROTEASOME REGULATORY SUBUNIT RPN10, SULFATE ION
Authors:Riedinger, C, Boehringer, J, Trempe, J.-F, Lowe, E.D, Brown, N.R, Gehring, K, Noble, M.E.M, Gordon, C, Endicott, J.A.
Deposit date:2010-02-10
Release date:2010-08-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:The Structure of Rpn10 and its Interactions with Polyubiquitin Chains and the Proteasome Subunit Rpn12.
J.Biol.Chem., 285, 2010
1EUB
DownloadVisualize
BU of 1eub by Molmil
SOLUTION STRUCTURE OF THE CATALYTIC DOMAIN OF HUMAN COLLAGENASE-3 (MMP-13) COMPLEXED TO A POTENT NON-PEPTIDIC SULFONAMIDE INHIBITOR
Descriptor: 1-METHYLOXY-4-SULFONE-BENZENE, 3-METHYLPYRIDINE, CALCIUM ION, ...
Authors:Zhang, X, Gonnella, N.C, Koehn, J, Pathak, N, Ganu, V, Melton, R, Parker, D, Hu, S.I, Nam, K.Y.
Deposit date:2000-04-14
Release date:2001-04-14
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the catalytic domain of human collagenase-3 (MMP-13) complexed to a potent non-peptidic sulfonamide inhibitor: binding comparison with stromelysin-1 and collagenase-1.
J.Mol.Biol., 301, 2000
4BG2
DownloadVisualize
BU of 4bg2 by Molmil
X-ray Crystal Structure of PatF from Prochloron didemni
Descriptor: PATF
Authors:Bent, A.F, Koehnke, J, Houssen, W.E, Smith, M.C.M, Jaspars, M, Naismith, J.H.
Deposit date:2013-03-22
Release date:2013-04-03
Last modified:2013-11-06
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:Structure of Patf from Prochloron Didemni.
Acta Crystallogr.,Sect.F, 69, 2013
2JQ7
DownloadVisualize
BU of 2jq7 by Molmil
Model for thiostrepton binding to the ribosomal L11-RNA
Descriptor: 50S RIBOSOMAL PROTEIN L11, RIBOSOMAL RNA, THIOSTREPTON
Authors:Jonker, H.R.A, Ilin, S, Grimm, S.K, Woehnert, J, Schwalbe, H.
Deposit date:2007-05-30
Release date:2007-07-03
Last modified:2021-08-18
Method:SOLUTION NMR
Cite:L11 Domain Rearrangement Upon Binding to RNA and Thiostrepton Studied by NMR Spectroscopy
Nucleic Acids Res., 35, 2007
7OC7
DownloadVisualize
BU of 7oc7 by Molmil
LasB, alpha-alkyl-N-aryl mercaptoacetamide
Descriptor: (2R)-N,3-diphenyl-2-sulfanyl-propanamide, CALCIUM ION, Neutral metalloproteinase, ...
Authors:Koehnke, J, Sikandar, A.
Deposit date:2021-04-26
Release date:2022-01-19
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Substrate-Inspired Fragment Merging and Growing Affords Efficacious LasB Inhibitors.
Angew.Chem.Int.Ed.Engl., 61, 2022
8CH5
DownloadVisualize
BU of 8ch5 by Molmil
Cryo-EM structure of the fd bacteriophage capsid major coat protein pVIII
Descriptor: Major capsid protein pVIII
Authors:Boehning, J, Bharat, T.A.M.
Deposit date:2023-02-07
Release date:2023-12-20
Last modified:2024-01-10
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Biophysical basis of filamentous phage tactoid-mediated antibiotic tolerance in P. aeruginosa.
Nat Commun, 14, 2023
8AUR
DownloadVisualize
BU of 8aur by Molmil
Cryo-EM structure of a TasA fibre
Descriptor: Major biofilm matrix component
Authors:Boehning, J, Bharat, T.A.M.
Deposit date:2022-08-25
Release date:2022-11-30
Method:ELECTRON MICROSCOPY (3.47 Å)
Cite:Donor-strand exchange drives assembly of the TasA scaffold in Bacillus subtilis biofilms.
Nat Commun, 13, 2022
8CIO
DownloadVisualize
BU of 8cio by Molmil
Cryo-EM structure of the CupE pilus from Pseudomonas aeruginosa
Descriptor: SCPU domain-containing protein
Authors:Boehning, J, Bharat, T.A.M.
Deposit date:2023-02-10
Release date:2023-03-22
Last modified:2023-04-26
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Architecture of the biofilm-associated archaic Chaperone-Usher pilus CupE from Pseudomonas aeruginosa.
Plos Pathog., 19, 2023
6F8B
DownloadVisualize
BU of 6f8b by Molmil
LasB bound to thiol based inhibitor
Descriptor: CALCIUM ION, Elastase, ZINC ION, ...
Authors:Koehnke, J, Sikandar, A.
Deposit date:2017-12-12
Release date:2018-03-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Binding Mode Characterization and Early in Vivo Evaluation of Fragment-Like Thiols as Inhibitors of the Virulence Factor LasB from Pseudomonas aeruginosa.
ACS Infect Dis, 4, 2018
6FZX
DownloadVisualize
BU of 6fzx by Molmil
LasB, hydroxymate Inhibitor Complex
Descriptor: CALCIUM ION, GLYCEROL, Keratinase KP2, ...
Authors:Koehnke, J, Sikandar, A.
Deposit date:2018-03-15
Release date:2018-09-05
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Tackling Pseudomonas aeruginosa Virulence by a Hydroxamic Acid-Based LasB Inhibitor.
ACS Chem. Biol., 13, 2018
8OO2
DownloadVisualize
BU of 8oo2 by Molmil
ChdA complex with amido-chelocardin
Descriptor: 2-carboxamido-2-deacetyl-chelocardin, MAGNESIUM ION, Putative transcriptional regulator
Authors:Koehnke, J, Sikandar, A.
Deposit date:2023-04-04
Release date:2023-08-02
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Revision of the Absolute Configurations of Chelocardin and Amidochelocardin.
Angew.Chem.Int.Ed.Engl., 62, 2023
3MW4
DownloadVisualize
BU of 3mw4 by Molmil
Crystal structure of beta-neurexin 3 without the splice insert 4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-D-mannopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Neurexin-2-beta, ...
Authors:Jin, X, Shapiro, L.
Deposit date:2010-05-05
Release date:2010-07-28
Last modified:2021-10-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Splice Form Dependence of beta-Neurexin/Neuroligin Binding Interactions.
Neuron, 67, 2010
3MW3
DownloadVisualize
BU of 3mw3 by Molmil
Crystal structure of beta-neurexin 2 with the splice insert 4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-D-mannopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Neurexin-2-beta
Authors:Jin, X, Shapiro, L.
Deposit date:2010-05-05
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:Splice Form Dependence of beta-Neurexin/Neuroligin Binding Interactions.
Neuron, 67, 2010
3MW2
DownloadVisualize
BU of 3mw2 by Molmil
Crystal structure of beta-neurexin 1 with the splice insert 4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[beta-D-mannopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Neurexin-1-alpha, PHOSPHATE ION
Authors:Jin, X, Shapiro, L.
Deposit date:2010-05-05
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Splice Form Dependence of beta-Neurexin/Neuroligin Binding Interactions.
Neuron, 67, 2010
6HTJ
DownloadVisualize
BU of 6htj by Molmil
Crystal structure of the translation recovery factor Trf from Sulfolobus solfataricus
Descriptor: Nucleic-acid-binding protein containing a Zn-ribbon, ZINC ION
Authors:Woehnert, J, Pogoryelov, D, Kaiser, M.
Deposit date:2018-10-04
Release date:2019-10-16
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal structure of the translation recovery factor Trf from Sulfolobus solfataricus.
Febs Open Bio, 2019
2RU2
DownloadVisualize
BU of 2ru2 by Molmil
NMR solution structure of [G5,T7,S9]-oxytocin
Descriptor: [G5,T7,S9]-oxytocin
Authors:Harvey, P, Craik, D.
Deposit date:2013-11-08
Release date:2014-10-22
Method:SOLUTION NMR
Cite:Oxytocic plant cyclotides as templates for peptide G protein-coupled receptor ligand design.
Proc.Natl.Acad.Sci.USA, 110, 2013
2MGO
DownloadVisualize
BU of 2mgo by Molmil
NMR solution structure of oxytocin
Descriptor: Oxytocin
Authors:Harvey, P.J, Craik, D.J.
Deposit date:2013-11-01
Release date:2014-10-22
Last modified:2023-06-14
Method:SOLUTION NMR
Cite:Oxytocic plant cyclotides as templates for peptide G protein-coupled receptor ligand design.
Proc.Natl.Acad.Sci.USA, 110, 2013

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon