Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8I17
DownloadVisualize
BU of 8i17 by Molmil
Structural basis for H2A-H2B recognitions by human Spt16
Descriptor: CHLORIDE ION, FACT complex subunit SPT16, Histone H2A type 1-B/E, ...
Authors:Huang, H, Li, Y.
Deposit date:2023-01-12
Release date:2023-02-22
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Structural basis for H2A-H2B recognitions by human Spt16.
Biochem.Biophys.Res.Commun., 651, 2023
7VUX
DownloadVisualize
BU of 7vux by Molmil
Complex structure of PD1 and 609A-Fab
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Huang, H, Zhu, Z, Zhao, J, Jiang, L, Yang, H, Deng, L, Meng, X, Ding, J, Yang, S, Zhao, L, Xu, W, Wang, X.
Deposit date:2021-11-04
Release date:2021-11-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.64 Å)
Cite:A strategy for the efficient construction of anti-PD1-based bispecific antibodies with desired IgG-like properties.
Mabs, 14, 2022
2LWP
DownloadVisualize
BU of 2lwp by Molmil
The NMR solution structure of the the ubiquitin homology domain of mouse BAG-1
Descriptor: BAG family molecular chaperone regulator 1
Authors:Huang, H, Yu, C.
Deposit date:2012-08-05
Release date:2013-06-19
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The NMR solution structure of the ubiquitin homology domain of Bcl-2-associated athanogene 1 (BAG-1-UBH) from Mus musculus.
Biochem.Biophys.Res.Commun., 431, 2013
2I7K
DownloadVisualize
BU of 2i7k by Molmil
Solution Structure of the Bromodomain of Human BRD7 Protein
Descriptor: Bromodomain-containing protein 7
Authors:Sun, H, Liu, J, Zhang, J, Huang, H, Wu, J, Shi, Y.
Deposit date:2006-08-31
Release date:2007-07-10
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of BRD7 bromodomain and its interaction with acetylated peptides from histone H3 and H4
Biochem.Biophys.Res.Commun., 358, 2007
6EDF
DownloadVisualize
BU of 6edf by Molmil
Fragment of a tyrosine-protein kinase
Descriptor: FYN, GLYCEROL, UNKNOWN ATOM OR ION
Authors:Tempel, W, Huang, H, Sochirca, I, Liu, K, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Sidhu, S.S, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2018-08-09
Release date:2018-08-29
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Fragment of a tyrosine-protein kinase
To be Published
4UW0
DownloadVisualize
BU of 4uw0 by Molmil
Low resolution structure of WbdD with C-terminal bundle ordered to residue 505
Descriptor: S-ADENOSYLMETHIONINE, WBDD
Authors:Hagelueken, G, Huang, H, Naismith, J.H.
Deposit date:2014-08-08
Release date:2014-08-27
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (3.87 Å)
Cite:A Coiled-Coil Domain Acts as a Molecular Ruler to Regulate O-Antigen Chain Length in Lipopolysaccharide.
Nat.Struct.Mol.Biol., 22, 2015
3DD5
DownloadVisualize
BU of 3dd5 by Molmil
Glomerella cingulata E600-cutinase complex
Descriptor: Cutinase, DIETHYL PHOSPHONATE
Authors:Nyon, M.P, Rice, D.W, Berrisford, J.M, Hounslow, A.M, Moir, A.J.G, Huang, H, Nathan, S, Mahadi, N.M, Farah Diba, A.B, Craven, C.J.
Deposit date:2008-06-05
Release date:2008-11-18
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Catalysis by Glomerella cingulata Cutinase Requires Conformational Cycling between the Active and Inactive States of Its Catalytic Triad
J.Mol.Biol., 385, 2009
7RSJ
DownloadVisualize
BU of 7rsj by Molmil
Structure of the VPS34 kinase domain with compound 14
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, N-{4-[(7R,8R)-4-oxo-7-(propan-2-yl)-4,5,6,7-tetrahydropyrazolo[1,5-a]pyrazin-2-yl]pyridin-2-yl}cyclopropanecarboxamide, ...
Authors:Hu, D.X, Patel, S, Chen, H, Wang, S, Staben, S, Dimitrova, Y.N, Wallweber, H.A, Lee, J.Y, Chan, G.K.Y, Sneeringer, C.J, Prangley, M.S, Moffat, J.G, Wu, C, Schutt, L.K, Salphati, L, Pang, J, McNamara, E, Huang, H, Chen, Y, Wang, Y, Zhao, W, Lim, J, Murthy, A, Siu, M.
Deposit date:2021-08-11
Release date:2021-11-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.881 Å)
Cite:Structure-Based Design of Potent, Selective, and Orally Bioavailable VPS34 Kinase Inhibitors.
J.Med.Chem., 65, 2022
7RSP
DownloadVisualize
BU of 7rsp by Molmil
Structure of the VPS34 kinase domain with compound 14
Descriptor: (7R,8R)-2-[(3R)-3-methylmorpholin-4-yl]-7-(propan-2-yl)-6,7-dihydropyrazolo[1,5-a]pyrazin-4(5H)-one, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3
Authors:Hu, D.X, Patel, S, Chen, H, Wang, S, Staben, S, Dimitrova, Y.N, Wallweber, H.A, Lee, J.Y, Chan, G.K.Y, Sneeringer, C.J, Prangley, M.S, Moffat, J.G, Wu, C, Schutt, L.K, Salphati, L, Pang, J, McNamara, E, Huang, H, Chen, Y, Wang, Y, Zhao, W, Lim, J, Murthy, A, Siu, M.
Deposit date:2021-08-11
Release date:2021-11-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Structure-Based Design of Potent, Selective, and Orally Bioavailable VPS34 Kinase Inhibitors.
J.Med.Chem., 65, 2022
7RSV
DownloadVisualize
BU of 7rsv by Molmil
Structure of the VPS34 kinase domain with compound 5
Descriptor: (5aS,8aR,9S)-2-[(3R)-3-methylmorpholin-4-yl]-5,5a,6,7,8,8a-hexahydro-4H-cyclopenta[e]pyrazolo[1,5-a]pyrazin-4-one, GLYCEROL, Phosphatidylinositol 3-kinase catalytic subunit type 3, ...
Authors:Hu, D.X, Patel, S, Chen, H, Wang, S, Staben, S, Dimitrova, Y.N, Wallweber, H.A, Lee, J.Y, Chan, G.K.Y, Sneeringer, C.J, Prangley, M.S, Moffat, J.G, Wu, C, Schutt, L.K, Salphati, L, Pang, J, McNamara, E, Huang, H, Chen, Y, Wang, Y, Zhao, W, Lim, J, Murthy, A, Siu, M.
Deposit date:2021-08-11
Release date:2021-11-24
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structure-Based Design of Potent, Selective, and Orally Bioavailable VPS34 Kinase Inhibitors.
J.Med.Chem., 65, 2022
9L22
DownloadVisualize
BU of 9l22 by Molmil
hDEK-nucleosome complex (conformation 2)
Descriptor: 601 DNA (189-MER), 601 DNA_R (189-MER), Histone H2A type 1-B/E, ...
Authors:Liu, Y, Wang, C, Huang, H.
Deposit date:2024-12-16
Release date:2025-05-07
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (3 Å)
Cite:DEK-nucleosome structure shows DEK modulates H3K27me3 and stem cell fate.
Nat.Struct.Mol.Biol., 2025
9L1X
DownloadVisualize
BU of 9l1x by Molmil
hDEK-nucleosome complex (conformation 1)
Descriptor: 601 DNA (189-MER), 601 DNA_R (189-MER), Histone H2A type 1-B/E, ...
Authors:Liu, Y, Wang, C, Huang, H.
Deposit date:2024-12-16
Release date:2025-05-07
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (2.69 Å)
Cite:DEK-nucleosome structure shows DEK modulates H3K27me3 and stem cell fate.
Nat.Struct.Mol.Biol., 2025
2W8H
DownloadVisualize
BU of 2w8h by Molmil
Crystal structure of spin labeled Wza24-345.
Descriptor: CHLORIDE ION, PUTATIVE OUTER MEMBRANE LIPOPROTEIN WZA, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate
Authors:Hagelueken, G, Ingledew, W.J, Huang, H, Petrovic-Stojanovska, B, Whitfield, C, ElMkami, H, Schiemann, O, Naismith, J.H.
Deposit date:2009-01-16
Release date:2009-02-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.76 Å)
Cite:Peldor Distance Fingerprinting of the Octameric Outer-Membrane Protein Wza from Escherichia Coli.
Angew.Chem.Int.Ed.Engl., 48, 2009
2W8I
DownloadVisualize
BU of 2w8i by Molmil
Crystal structure of Wza24-345.
Descriptor: PUTATIVE OUTER MEMBRANE LIPOPROTEIN WZA
Authors:Hagelueken, G, Ingledew, W.J, Huang, H, Petrovic-Stojanovska, B, Whitfield, C, ElMkami, H, Schiemann, O, Naismith, J.H.
Deposit date:2009-01-16
Release date:2009-02-10
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (3 Å)
Cite:Peldor Distance Fingerprinting of the Octameric Outer-Membrane Protein Wza from Escherichia Coli.
Angew.Chem.Int.Ed.Engl., 48, 2009
5UIB
DownloadVisualize
BU of 5uib by Molmil
Crystal Structure of an Oxidoreductase from Agrobacterium radiobacter in Complex with NAD+, L-tartaric acid and Magnesium
Descriptor: L(+)-TARTARIC ACID, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Cook, W.J, Fedorov, A.A, Fedorov, E.V, Huang, H, Bonanno, J.B, Gerlt, J.A, Almo, S.C.
Deposit date:2017-01-13
Release date:2017-01-25
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal Structure of an Oxidoreductase from Agrobacterium radiobacter in Complex with NAD+, L-tartaric acid and Magnesium
To be published
5T57
DownloadVisualize
BU of 5t57 by Molmil
Crystal Structure of a Semialdehyde dehydrogenase NAD-binding Protein from Cupriavidus necator in Complex with Calcium and NAD
Descriptor: CALCIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, Semialdehyde dehydrogenase NAD-binding protein, ...
Authors:Cook, W.J, Fedorov, A.A, Fedorov, E.V, Huang, H, Bonanno, J.B, Gerlt, J.A, Almo, S.C.
Deposit date:2016-08-30
Release date:2016-09-14
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Crystal Structure of a Semialdehyde dehydrogenase NAD-binding Protein from Cupriavidus necator in Complex with Calcium and NAD
To be published
2WJF
DownloadVisualize
BU of 2wjf by Molmil
Crystal structure of the tyrosine phosphatase Cps4B from Steptococcus pneumoniae TIGR4 in complex with phosphate.
Descriptor: MANGANESE (II) ION, PHOSPHATE ION, TYROSINE-PROTEIN PHOSPHATASE CPSB
Authors:Hagelueken, G, Huang, H, Naismith, J.H.
Deposit date:2009-05-25
Release date:2009-07-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.22 Å)
Cite:Crystal Structures of Wzb of Escherichia Coli and Cpsb of Streptococcus Pneumoniae, Representatives of Two Families of Tyrosine Phosphatases that Regulate Capsule Assembly.
J.Mol.Biol., 392, 2009
2WJE
DownloadVisualize
BU of 2wje by Molmil
Crystal structure of the tyrosine phosphatase Cps4B from Steptococcus pneumoniae TIGR4.
Descriptor: MANGANESE (II) ION, TYROSINE-PROTEIN PHOSPHATASE CPSB
Authors:Hagelueken, G, Huang, H, Naismith, J.H.
Deposit date:2009-05-25
Release date:2009-07-14
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (1.899 Å)
Cite:Crystal Structures of Wzb of Escherichia Coli and Cpsb of Streptococcus Pneumoniae, Representatives of Two Families of Tyrosine Phosphatases that Regulate Capsule Assembly.
J.Mol.Biol., 392, 2009
2WJD
DownloadVisualize
BU of 2wjd by Molmil
Crystal structure of the tyrosine phosphatase Cps4B from Steptococcus pneumoniae TIGR4.
Descriptor: MANGANESE (II) ION, SAMARIUM (III) ION, SULFATE ION, ...
Authors:Hagelueken, G, Huang, H, Naismith, J.H.
Deposit date:2009-05-25
Release date:2009-07-14
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.799 Å)
Cite:Crystal Structures of Wzb of Escherichia Coli and Cpsb of Streptococcus Pneumoniae, Representatives of Two Families of Tyrosine Phosphatases that Regulate Capsule Assembly.
J.Mol.Biol., 392, 2009
1BRF
DownloadVisualize
BU of 1brf by Molmil
Rubredoxin (Wild Type) from Pyrococcus Furiosus
Descriptor: FE (III) ION, PROTEIN (RUBREDOXIN)
Authors:Bau, R, Rees, D.C, Kurtz, D.M, Scott, R.A, Huang, H, Adams, M.W.W, Eidsness, M.K.
Deposit date:1998-08-24
Release date:1998-09-02
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (0.95 Å)
Cite:Crystal Structure of Rubredoxin from Pyrococcus Furiosus at 0.95 Angstroms Resolution, and the structures of N-terminal methionine and formylmethionine variants of Pf Rd. Contributions of N-terminal interactions to thermostability
J.BIOL.INORG.CHEM., 3, 1998
1BQ8
DownloadVisualize
BU of 1bq8 by Molmil
Rubredoxin (Methionine Mutant) from Pyrococcus Furiosus
Descriptor: FE (III) ION, PROTEIN (RUBREDOXIN)
Authors:Bau, R, Rees, D.C, Kurtz, D.M, Scott, R.A, Huang, H, Adams, M.W.W, Eidsness, M.K.
Deposit date:1998-08-22
Release date:1998-08-26
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Crystal Structure of Rubredoxin from Pyrococcus Furiosus at 0.95 Angstroms Resolution, and the structures of N-terminal methionine and formylmethionine variants of Pf Rd. Contributions of N-terminal interactions to thermostability
J.BIOL.INORG.CHEM., 3, 1998
1BQ9
DownloadVisualize
BU of 1bq9 by Molmil
Rubredoxin (Formyl Methionine Mutant) from Pyrococcus Furiosus
Descriptor: FE (III) ION, PROTEIN (RUBREDOXIN)
Authors:Bau, R, Rees, D.C, Kurtz, D.M, Scott, R.A, Huang, H, Adams, M.W.W, Eidsness, M.K.
Deposit date:1998-08-22
Release date:1998-08-26
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Crystal Structure of Rubredoxin from Pyrococcus Furiosus at 0.95 Angstroms Resolution, and the structures of N-terminal methionine and formylmethionine variants of Pf Rd. Contributions of N-terminal interactions to thermostability
J.BIOL.INORG.CHEM., 3, 1998
5TNV
DownloadVisualize
BU of 5tnv by Molmil
Crystal Structure of a Xylose isomerase-like TIM barrel Protein from Mycobacterium smegmatis in Complex with Magnesium
Descriptor: AP endonuclease, family protein 2, MAGNESIUM ION
Authors:Cook, W.J, Fedorov, A.A, Fedorov, E.V, Huang, H, Bonanno, J.B, Gerlt, J.A, Almo, S.C.
Deposit date:2016-10-14
Release date:2016-11-09
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Crystal Structure of a Xylose isomerase-like TIM barrel Protein from Mycobacterium smegmatis in Complex with Magnesium
To Be Published
6M11
DownloadVisualize
BU of 6m11 by Molmil
Crystal structure of Rnase L in complex with Sunitinib
Descriptor: 5'-O-MONOPHOSPHORYLADENYLYL(2'->5')ADENYLYL(2'->5')ADENOSINE, N-[2-(diethylamino)ethyl]-5-[(Z)-(5-fluoro-2-oxo-1,2-dihydro-3H-indol-3-ylidene)methyl]-2,4-dimethyl-1H-pyrrole-3-carbo xamide, PHOSPHATE ION, ...
Authors:Tang, J, Huang, H.
Deposit date:2020-02-24
Release date:2020-09-02
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:Sunitinib inhibits RNase L by destabilizing its active dimer conformation.
Biochem.J., 477, 2020
6WDR
DownloadVisualize
BU of 6wdr by Molmil
Subunit joining exposes nascent pre-40S rRNA for processing and quality control
Descriptor: 20S ribosomal RNA, 40S ribosomal protein S0-A, 40S ribosomal protein S10-A, ...
Authors:Rai, J, Parker, M.D, Huang, H, Choy, S, Ghalei, H, Johnson, M.C, Karbstein, K, Stroupe, M.E.
Deposit date:2020-04-01
Release date:2020-09-30
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:An open interface in the pre-80S ribosome coordinated by ribosome assembly factors Tsr1 and Dim1 enables temporal regulation of Fap7.
Rna, 27, 2021

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon