Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5TXP
DownloadVisualize
BU of 5txp by Molmil
STRUCTURE OF Q151M complex (A62V, V75I, F77L, F116Y, Q151M) mutant HIV-1 REVERSE TRANSCRIPTASE (RT) TERNARY COMPLEX WITH A DOUBLE STRANDED DNA AND AN INCOMING DDATP
Descriptor: 1,2-ETHANEDIOL, 2',3'-dideoxyadenosine triphosphate, DNA (5'-D(*CP*AP*GP*TP*CP*CP*CP*TP*GP*TP*TP*CP*GP*GP*(MRG)P*CP*GP*CP*CP*G)-3'), ...
Authors:Das, K, Martinez, S.M, Arnold, E.
Deposit date:2016-11-17
Release date:2017-04-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structural Insights into HIV Reverse Transcriptase Mutations Q151M and Q151M Complex That Confer Multinucleoside Drug Resistance.
Antimicrob. Agents Chemother., 61, 2017
5G0S
DownloadVisualize
BU of 5g0s by Molmil
InhA in complex with a DNA encoded library hit
Descriptor: ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE [NADH], N-[4-[2-[(2S)-4-[2-(methylamino)-2-oxidanylidene-ethyl]-3-oxidanylidene-2-(phenylmethyl)piperazin-1-yl]-2-oxidanylidene-ethyl]cyclohexyl]-2-(3-methyl-1-benzothiophen-2-yl)ethanamide, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
Authors:Read, J.A, Breed, J.
Deposit date:2016-03-22
Release date:2016-11-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Discovery of Cofactor-Specific, Bactericidal Mycobacterium Tuberculosis Inha Inhibitors Using DNA-Encoded Library Technology
Proc.Natl.Acad.Sci.USA, 113, 2016
3LK0
DownloadVisualize
BU of 3lk0 by Molmil
X-ray structure of bovine SC0067,Ca(2+)-S100B
Descriptor: 3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine, CALCIUM ION, Protein S100-B
Authors:Charpentier, T.H, Weber, D.J, Wilder, P.W.
Deposit date:2010-01-26
Release date:2010-12-29
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:In vitro screening and structural characterization of inhibitors of the S100B-p53 interaction.
Int J High Throughput Screen, 2010, 2010
6DC0
DownloadVisualize
BU of 6dc0 by Molmil
Tribbles (TRIB1) pseudokinase fused to CCAAT-enhancer binding protein (C/EBPalpha) degron
Descriptor: Tribbles homolog 1,CCAAT/enhancer-binding protein alpha
Authors:Jamieson, S.A, Brewster, J.L, Mace, P.D.
Deposit date:2018-05-03
Release date:2018-10-10
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Substrate binding allosterically relieves autoinhibition of the pseudokinase TRIB1.
Sci Signal, 11, 2018
5WH8
DownloadVisualize
BU of 5wh8 by Molmil
Cellulase Cel5C_n
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, PENTAETHYLENE GLYCOL, ...
Authors:Koropatkin, N.M, Pope, P.B, Naas, A.E.
Deposit date:2017-07-15
Release date:2018-03-14
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:"Candidatus Paraporphyromonas polyenzymogenes" encodes multi-modular cellulases linked to the type IX secretion system.
Microbiome, 6, 2018
6DI8
DownloadVisualize
BU of 6di8 by Molmil
Crystal structure of bovine alpha-chymotrypsin in space group P65
Descriptor: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ...
Authors:Marshall, A.C, Keiller, B.G, Bruning, J.B.
Deposit date:2018-05-23
Release date:2019-01-23
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.859 Å)
Cite:Crystal Structure of Bovine Alpha-Chymotrypsin in Space Group P65
Crystals, 8, 2018
4ZXR
DownloadVisualize
BU of 4zxr by Molmil
Structure of Thaumatin wrapped in graphene within vacuum
Descriptor: GLYCEROL, L(+)-TARTARIC ACID, Thaumatin-1
Authors:Aller, P, Warren, A.J, Trincao, J, Evans, G.
Deposit date:2015-05-20
Release date:2015-10-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:In vacuo X-ray data collection from graphene-wrapped protein crystals.
Acta Crystallogr.,Sect.D, 71, 2015
3MMJ
DownloadVisualize
BU of 3mmj by Molmil
Structure of the PTP-like phytase from Selenomonas ruminantium in complex with myo-inositol hexakisphosphate
Descriptor: ACETATE ION, CHLORIDE ION, GLYCEROL, ...
Authors:Gruninger, R.J, Selinger, L.B, Mosimann, S.C.
Deposit date:2010-04-20
Release date:2011-06-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Substrate binding in protein-tyrosine phosphatase-like inositol polyphosphatases.
J.Biol.Chem., 287, 2012
6DL7
DownloadVisualize
BU of 6dl7 by Molmil
Human mitochondrial ClpP in complex with ONC201 (TIC10)
Descriptor: 7-benzyl-4-[(2-methylphenyl)methyl]-6,7,8,9-tetrahydroimidazo[1,2-a]pyrido[3,4-e]pyrimidin-5(4H)-one, ATP-dependent Clp protease proteolytic subunit, mitochondrial
Authors:Halgas, O, Zarabi, S.F, Schimmer, A, Pai, E.F.
Deposit date:2018-05-31
Release date:2019-05-08
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mitochondrial ClpP-Mediated Proteolysis Induces Selective Cancer Cell Lethality.
Cancer Cell, 35, 2019
5A5Q
DownloadVisualize
BU of 5a5q by Molmil
Crystal structure of human ATAD2 bromodomain in complex with 3-methyl- 8-piperidin-4-ylamino-1,2-dihydro-1,7-naphthyridin-2-one hydrochloride
Descriptor: 1,2-ETHANEDIOL, 3-methyl-8-[(piperidin-4-yl)amino]-1,2-dihydro-1,7-naphthyridin-2-one, ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 2, ...
Authors:Chung, C, Bamborough, P, Demont, E.
Deposit date:2015-06-20
Release date:2015-07-22
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Fragment-Based Discovery of Low-Micromolar Atad2 Bromodomain Inhibitors.
J.Med.Chem., 58, 2015
3MLA
DownloadVisualize
BU of 3mla by Molmil
BaNadD in complex with inhibitor 1_02
Descriptor: 4-[2-(anthracen-9-ylmethylidene)hydrazino]-N-(3-chlorophenyl)-4-oxobutanamide, DIMETHYL SULFOXIDE, FORMIC ACID, ...
Authors:Huang, N, Eyobo, Y, Zhang, H.
Deposit date:2010-04-16
Release date:2010-07-28
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Complexes of bacterial nicotinate mononucleotide adenylyltransferase with inhibitors: implication for structure-based drug design and improvement.
J.Med.Chem., 53, 2010
5WEP
DownloadVisualize
BU of 5wep by Molmil
Crystal structure of fosfomycin resistance protein FosA3 with inhibitor (ANY1) bound
Descriptor: 6,6'-(4-nitro-1H-pyrazole-3,5-diyl)bis(3-bromopyrazolo[1,5-a]pyrimidin-2(1H)-one), FosA3, ZINC ION
Authors:Klontz, E.H, Sundberg, E.J.
Deposit date:2017-07-10
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (3.502 Å)
Cite:Small-Molecule Inhibitor of FosA Expands Fosfomycin Activity to Multidrug-Resistant Gram-Negative Pathogens.
Antimicrob. Agents Chemother., 63, 2019
5MES
DownloadVisualize
BU of 5mes by Molmil
MCL1 FAB COMPLEX IN COMPLEX WITH COMPOUND 29
Descriptor: (5~{R},13~{S},17~{S})-5-[[4-chloranyl-3-(2-phenylethyl)phenyl]methyl]-13-[(4-chlorophenyl)methyl]-8-methyl-1,4,8,12,16-pentazatricyclo[15.8.1.0^{20,25}]hexacosa-20(25),21,23-triene-3,7,15,26-tetrone, Heavy Chain, Induced myeloid leukemia cell differentiation protein Mcl-1 homolog,Induced myeloid leukemia cell differentiation protein Mcl-1, ...
Authors:Hargreaves, D.
Deposit date:2016-11-16
Release date:2017-01-18
Last modified:2017-03-08
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structure Based Design of Non-Natural Peptidic Macrocyclic Mcl-1 Inhibitors.
ACS Med Chem Lett, 8, 2017
4G1Q
DownloadVisualize
BU of 4g1q by Molmil
Crystal structure of HIV-1 reverse transcriptase (RT) in complex with Rilpivirine (TMC278, Edurant), a non-nucleoside rt-inhibiting drug
Descriptor: 1,2-ETHANEDIOL, 4-{[4-({4-[(E)-2-cyanoethenyl]-2,6-dimethylphenyl}amino)pyrimidin-2-yl]amino}benzonitrile, MAGNESIUM ION, ...
Authors:Bauman, J.D, Patel, D, Das, K, Arnold, E.
Deposit date:2012-07-11
Release date:2013-02-06
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Snapshot of the equilibrium dynamics of a drug bound to HIV-1 reverse transcriptase.
Nat Chem, 5, 2013
1HNV
DownloadVisualize
BU of 1hnv by Molmil
STRUCTURE OF HIV-1 RT(SLASH)TIBO R 86183 COMPLEX REVEALS SIMILARITY IN THE BINDING OF DIVERSE NONNUCLEOSIDE INHIBITORS
Descriptor: 5-CHLORO-8-METHYL-7-(3-METHYL-BUT-2-ENYL)-6,7,8,9-TETRAHYDRO-2H-2,7,9A-TRIAZA-BENZO[CD]AZULENE-1-THIONE, HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P51), HIV-1 REVERSE TRANSCRIPTASE (SUBUNIT P66)
Authors:Das, K, Ding, J, Arnold, E.
Deposit date:1995-03-30
Release date:1995-07-10
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Structure of HIV-1 RT/TIBO R 86183 complex reveals similarity in the binding of diverse nonnucleoside inhibitors.
Nat.Struct.Biol., 2, 1995
1DLO
DownloadVisualize
BU of 1dlo by Molmil
HUMAN IMMUNODEFICIENCY VIRUS TYPE 1
Descriptor: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE
Authors:Hsiou, Y, Ding, J, Das, K, Hughes, S, Arnold, E.
Deposit date:1996-04-17
Release date:1996-08-01
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of unliganded HIV-1 reverse transcriptase at 2.7 A resolution: implications of conformational changes for polymerization and inhibition mechanisms.
Structure, 4, 1996
5OAT
DownloadVisualize
BU of 5oat by Molmil
PINK1 structure
Descriptor: MAGNESIUM ION, Serine/threonine-protein kinase PINK1, mitochondrial-like Protein
Authors:Kumar, A, Tamjar, J, Woodroof, H.I, Raimi, O.G, Waddell, A.Y, Peggie, M, Muqit, M.M.K, van Aalten, D.M.F.
Deposit date:2017-06-23
Release date:2017-10-11
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.78 Å)
Cite:Structure of PINK1 and mechanisms of Parkinson's disease associated mutations.
Elife, 6, 2017
3MYG
DownloadVisualize
BU of 3myg by Molmil
Aurora A Kinase complexed with SCH 1473759
Descriptor: 2-{ethyl[(5-{[6-methyl-3-(1H-pyrazol-4-yl)imidazo[1,2-a]pyrazin-8-yl]amino}isothiazol-3-yl)methyl]amino}-2-methylpropan-1-ol, Serine/threonine-protein kinase 6, TETRAETHYLENE GLYCOL
Authors:Hruza, A, Prosis, W, Ramanathan, L.
Deposit date:2010-05-10
Release date:2010-07-21
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Discovery of a Potent, Injectable Inhibitor of Aurora Kinases Based on the Imidazo-[1,2-a]-Pyrazine Core.
ACS Med Chem Lett, 1, 2010
2AZ5
DownloadVisualize
BU of 2az5 by Molmil
Crystal Structure of TNF-alpha with a small molecule inhibitor
Descriptor: 6,7-DIMETHYL-3-[(METHYL{2-[METHYL({1-[3-(TRIFLUOROMETHYL)PHENYL]-1H-INDOL-3-YL}METHYL)AMINO]ETHYL}AMINO)METHYL]-4H-CHROMEN-4-ONE, Tumor necrosis factor (TNF-alpha) (Tumor necrosis factor ligand superfamily member 2) (TNF-a) (Cachectin) [Contains: Tumor necrosis factor, membrane form; Tumor necrosis factor, ...
Authors:He, M.M.
Deposit date:2005-09-09
Release date:2005-11-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Small-molecule inhibition of TNF-alpha.
Science, 310, 2005
8BB6
DownloadVisualize
BU of 8bb6 by Molmil
Crystal structure of Arabidopsis thaliana sucrose transporter SUC1
Descriptor: Sucrose transport protein SUC1
Authors:Bavnhoej, L, Pedersen, B.P.
Deposit date:2022-10-12
Release date:2023-05-31
Last modified:2024-05-01
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Structure and sucrose binding mechanism of the plant SUC1 sucrose transporter.
Nat.Plants, 9, 2023
1EDW
DownloadVisualize
BU of 1edw by Molmil
SOLUTION STRUCTURE OF THIRD INTRADISKAL LOOP OF BOVINE RHODOPSIN (RESIDUES 268-293)
Descriptor: RHODOPSIN
Authors:Yeagle, P.L, Salloum, A, Chopra, A, Bhawsar, N, Ali, L.
Deposit date:2000-01-28
Release date:2000-08-09
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structures of the intradiskal loops and amino terminus of the G-protein receptor, rhodopsin.
J.Pept.Res., 55, 2000
8BCK
DownloadVisualize
BU of 8bck by Molmil
Recombinant Tipula oleracea Nudivirus polyhedrin
Descriptor: CALCIUM ION, MOBP
Authors:Keown, J.R, Grimes, J.M.
Deposit date:2022-10-16
Release date:2023-07-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Atomic structure of a nudivirus occlusion body protein determined from a 70-year-old crystal sample.
Nat Commun, 14, 2023
8B3X
DownloadVisualize
BU of 8b3x by Molmil
High resolution crystal structure of dimeric SUDV VP40
Descriptor: Matrix protein VP40
Authors:Werner, A.-D, Norris, M, Saphire, E.O, Becker, S.
Deposit date:2022-09-17
Release date:2023-06-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.531 Å)
Cite:The C-terminus of Sudan ebolavirus VP40 contains a functionally important CX n C motif, a target for redox modifications.
Structure, 31, 2023
8BC5
DownloadVisualize
BU of 8bc5 by Molmil
Recombinant Tipula oleracea Nudivirus Polyhedrin - Selenomethionine
Descriptor: CALCIUM ION, MOBP
Authors:Keown, J.R, Grimes, J.M.
Deposit date:2022-10-15
Release date:2023-07-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Atomic structure of a nudivirus occlusion body protein determined from a 70-year-old crystal sample.
Nat Commun, 14, 2023
8BBT
DownloadVisualize
BU of 8bbt by Molmil
Native Tipula oleracea Nudivirus polyhedrin - 1960
Descriptor: CALCIUM ION, MOBP
Authors:Keown, J.R, Grimes, J.M.
Deposit date:2022-10-14
Release date:2023-07-12
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Atomic structure of a nudivirus occlusion body protein determined from a 70-year-old crystal sample.
Nat Commun, 14, 2023

223790

PDB entries from 2024-08-14

PDB statisticsPDBj update infoContact PDBjnumon