Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
4GDX
DownloadVisualize
BU of 4gdx by Molmil
Crystal Structure of Human Gamma-Glutamyl Transpeptidase--Glutamate complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, GLUTAMIC ACID, ...
Authors:West, M.B, Chen, Y, Wickham, S, Heroux, A, Cahill, K, Hanigan, M.H, Mooers, B.H.M.
Deposit date:2012-08-01
Release date:2013-09-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Novel Insights into Eukaryotic gamma-Glutamyltranspeptidase 1 from the Crystal Structure of the Glutamate-bound Human Enzyme.
J.Biol.Chem., 288, 2013
3I3U
DownloadVisualize
BU of 3i3u by Molmil
Crystal structure of lp_1913 protein from lactobacillus plantarum, northeast structural genomics Consortium target lpr140a
Descriptor: uncharacterized protein lp_1913
Authors:Seetharaman, J, Chen, Y, Forouhar, F, Sahdev, S, Janjua, H, Xiao, R, Ciccosanti, C, Foote, E.L, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-06-30
Release date:2009-07-21
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of lp_1913 protein from lactobacillus plantarum, northeast structural genomics Consortium target lpr140a
To be Published
2BX9
DownloadVisualize
BU of 2bx9 by Molmil
Crystal structure of B.subtilis Anti-TRAP protein, an antagonist of TRAP-RNA interactions
Descriptor: TRYPTOPHAN RNA-BINDING ATTENUATOR PROTEIN-INHIBITORY PROTEIN, ZINC ION
Authors:Shevtsov, M.B, Chen, Y, Gollnick, P, Antson, A.A.
Deposit date:2005-07-26
Release date:2005-11-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Bacillus Subtilis Anti-Trap Protein, an Antagonist of Trap/RNA Interaction.
Proc.Natl.Acad.Sci.USA, 102, 2005
3IPF
DownloadVisualize
BU of 3ipf by Molmil
Crystal structure of the Q251Q8_DESHY protein from Desulfitobacterium hafniense. Northeast Structural Genomics Consortium Target DhR8c.
Descriptor: uncharacterized protein
Authors:Vorobiev, S.M, Chen, Y, Seetharaman, J, Janjua, H, Xiao, R, Ciccosanti, C, Wang, H, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Andre, I, Rossi, P, Kennedy, M, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-08-17
Release date:2009-09-15
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.988 Å)
Cite:Crystal structure of the Q251Q8_DESHY protein from Desulfitobacterium hafniense.
To be Published
5YBX
DownloadVisualize
BU of 5ybx by Molmil
Crystal structure of the N-terminal domain of Bqt4 in S.pombe
Descriptor: Bouquet formation protein 4
Authors:Hu, C, Chen, Y.
Deposit date:2017-09-05
Release date:2018-09-19
Last modified:2019-02-20
Method:X-RAY DIFFRACTION (2.501 Å)
Cite:The Inner Nuclear Membrane Protein Bqt4 in Fission Yeast Contains a DNA-Binding Domain Essential for Telomere Association with the Nuclear Envelope.
Structure, 27, 2019
3QRF
DownloadVisualize
BU of 3qrf by Molmil
Structure of a domain-swapped FOXP3 dimer
Descriptor: Forkhead box protein P3, MAGNESIUM ION, Nuclear factor of activated T-cells, ...
Authors:Bandukwala, H.S, Wu, Y, Feurer, M, Chen, Y, Barbosa, B, Ghosh, S, Stroud, J.C, Benoist, C, Mathis, D, Rao, A, Chen, L.
Deposit date:2011-02-17
Release date:2011-04-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structure of a Domain-Swapped FOXP3 Dimer on DNA and Its Function in Regulatory T Cells.
Immunity, 34, 2011
5IS0
DownloadVisualize
BU of 5is0 by Molmil
Structure of TRPV1 in complex with capsazepine, determined in lipid nanodisc
Descriptor: Transient receptor potential cation channel subfamily V member 1, capsazepine
Authors:Gao, Y, Cao, E, Julius, D, Cheng, Y.
Deposit date:2016-03-15
Release date:2016-05-25
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.43 Å)
Cite:TRPV1 structures in nanodiscs reveal mechanisms of ligand and lipid action.
Nature, 534, 2016
5IRX
DownloadVisualize
BU of 5irx by Molmil
Structure of TRPV1 in complex with DkTx and RTX, determined in lipid nanodisc
Descriptor: (2S)-2-(acetyloxy)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}propyl pentanoate, (2S)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(hexanoyloxy)propyl hexanoate, (4R,7S)-4-hydroxy-N,N,N-trimethyl-4,9-dioxo-7-[(pentanoyloxy)methyl]-3,5,8-trioxa-4lambda~5~-phosphatetradecan-1-aminium, ...
Authors:Gao, Y, Cao, E, Julius, D, Cheng, Y.
Deposit date:2016-03-14
Release date:2016-05-25
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:TRPV1 structures in nanodiscs reveal mechanisms of ligand and lipid action.
Nature, 534, 2016
4QLA
DownloadVisualize
BU of 4qla by Molmil
Crystal structure of juvenile hormone epoxide hydrolase from the silkworm Bombyx mori
Descriptor: Juvenile hormone epoxide hydrolase, PENTAETHYLENE GLYCOL
Authors:Zhou, K, Jia, N, Hu, C, Jiang, Y.L, Yang, J.P, Chen, Y, Li, S, Zhou, C.Z.
Deposit date:2014-06-11
Release date:2014-09-03
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of juvenile hormone epoxide hydrolase from the silkworm Bombyx mori.
Proteins, 82, 2014
2DLB
DownloadVisualize
BU of 2dlb by Molmil
X-ray Crystal Structure of Protein yopT from Bacillus subtilis. Northeast Structural Genomics Consortium Target SR412
Descriptor: yopT
Authors:Kuzin, A.P, Chen, Y, Seetharaman, J, Ho, C.-K, Cunningham, K, Janjua, H, Conover, K, Ma, L.-C, Xiao, R, Acton, T.B, Montelione, G.T, Hunt, J.F, Tong, L, Northeast Structural Genomics Consortium (NESG)
Deposit date:2006-04-18
Release date:2006-04-25
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:X-ray structure of hypothetical protein from Bacillus subtilis O34498 at the resolution of 1.2A. NESG target SR412
To be published
5FNO
DownloadVisualize
BU of 5fno by Molmil
Manganese Lipoxygenase
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MANGANESE (II) ION, ...
Authors:Wennman, A, Karkehabadi, S, Oliw, E.H, Chen, Y.
Deposit date:2015-11-16
Release date:2016-01-27
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.038 Å)
Cite:Crystal Structure of Manganese Lipoxygenase of the Rice Blast Fungus Magnaporthe Oryzae
J.Biol.Chem., 291, 2016
4RDJ
DownloadVisualize
BU of 4rdj by Molmil
Crystal structure of Norovirus Boxer P domain
Descriptor: Capsid
Authors:Hao, N, Chen, Y, Xia, M, Liu, W, Tan, M, Jiang, X, Li, X.
Deposit date:2014-09-19
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structures of GI.8 Boxer virus P dimers in complex with HBGAs, a novel evolutionary path selected by the Lewis epitope.
Protein Cell, 6, 2015
4RDL
DownloadVisualize
BU of 4rdl by Molmil
Crystal structure of Norovirus Boxer P domain in complex with Lewis y tetrasaccharide
Descriptor: Capsid, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-alpha-D-glucopyranose
Authors:Hao, N, Chen, Y, Xia, M, Liu, W, Tan, M, Jiang, X, Li, X.
Deposit date:2014-09-19
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.449 Å)
Cite:Crystal structures of GI.8 Boxer virus P dimers in complex with HBGAs, a novel evolutionary path selected by the Lewis epitope.
Protein Cell, 6, 2015
4QSG
DownloadVisualize
BU of 4qsg by Molmil
Crystal structure of gas vesicle protein GvpF from Microcystis aeruginosa
Descriptor: Gas vesicle protein
Authors:Xu, B.Y, Dai, Y.N, Zhou, K, Ren, Y.M, Liu, Y.T, Chen, Y, Zhou, C.Z.
Deposit date:2014-07-03
Release date:2014-11-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure of the gas vesicle protein GvpF from the cyanobacterium Microcystis aeruginosa.
Acta Crystallogr.,Sect.D, 70, 2014
4RDK
DownloadVisualize
BU of 4rdk by Molmil
Crystal structure of Norovirus Boxer P domain in complex with Lewis b tetrasaccharide
Descriptor: Capsid, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-alpha-D-glucopyranose
Authors:Hao, N, Chen, Y, Xia, M, Liu, W, Tan, M, Jiang, X, Li, X.
Deposit date:2014-09-19
Release date:2015-01-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.629 Å)
Cite:Crystal structures of GI.8 Boxer virus P dimers in complex with HBGAs, a novel evolutionary path selected by the Lewis epitope.
Protein Cell, 6, 2015
5IRZ
DownloadVisualize
BU of 5irz by Molmil
Structure of TRPV1 determined in lipid nanodisc
Descriptor: (2S)-1-{[(R)-hydroxy{[(1R,2R,3S,4S,5S,6S)-2,3,4,5,6-pentahydroxycyclohexyl]oxy}phosphoryl]oxy}-3-(pentanoyloxy)propan-2-yl decanoate, (2S)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(hexanoyloxy)propyl hexanoate, (4R,7S)-4-hydroxy-N,N,N-trimethyl-4,9-dioxo-7-[(pentanoyloxy)methyl]-3,5,8-trioxa-4lambda~5~-phosphatetradecan-1-aminium, ...
Authors:Gao, Y, Cao, E, Julius, D, Cheng, Y.
Deposit date:2016-03-15
Release date:2016-05-25
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (3.28 Å)
Cite:TRPV1 structures in nanodiscs reveal mechanisms of ligand and lipid action.
Nature, 534, 2016
3ILM
DownloadVisualize
BU of 3ilm by Molmil
Crystal Structure of the Alr3790 protein from Anabaena sp. Northeast Structural Genomics Consortium Target NsR437h
Descriptor: Alr3790 protein, MANGANESE (II) ION
Authors:Vorobiev, S, Chen, Y, Maglaqui, M, Ciccosanti, C, Mao, L, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-08-07
Release date:2009-09-22
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.262 Å)
Cite:Crystal Structure of the Alr3790 protein from Anabaena sp.
To be Published
4I5V
DownloadVisualize
BU of 4i5v by Molmil
Crystal structure of yeast Ap4A phosphorylase Apa2 in complex with Ap4A
Descriptor: 5',5'''-P-1,P-4-tetraphosphate phosphorylase 2, BIS(ADENOSINE)-5'-TETRAPHOSPHATE
Authors:Jiang, Y.L, Hou, W.T, Chen, Y, Zhou, C.Z.
Deposit date:2012-11-29
Release date:2013-05-08
Last modified:2014-02-05
Method:X-RAY DIFFRACTION (2.696 Å)
Cite:Structures of yeast Apa2 reveal catalytic insights into a canonical AP4A phosphorylase of the histidine triad superfamily
J.Mol.Biol., 425, 2013
4HRI
DownloadVisualize
BU of 4hri by Molmil
Crystal structure of HetR in complex with a 21-bp palindromic DNA at the upstream of the hetP promoter from Anabaena
Descriptor: CALCIUM ION, DNA (5'-D(P*AP*TP*GP*AP*GP*GP*GP*GP*TP*TP*AP*GP*AP*CP*CP*CP*CP*TP*CP*GP*C)-3'), DNA (5'-D(P*GP*CP*GP*AP*GP*GP*GP*GP*TP*CP*TP*AP*AP*CP*CP*CP*CP*TP*CP*AP*T)-3'), ...
Authors:Hu, H.X, Jiang, Y.L, Zhao, M.X, Chen, Y, Zhang, C.C, Zhou, C.Z.
Deposit date:2012-10-28
Release date:2013-04-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.954 Å)
Cite:Structural and biochemical analyses of Anabaena HetR reveal insights into its binding to DNA targets and the inhibitory hexapeptide ERGSGR
To be Published
6LQZ
DownloadVisualize
BU of 6lqz by Molmil
Solution structure of Taf14ET-Sth1EBMC
Descriptor: Nuclear protein STH1/NPS1, Transcription initiation factor TFIID subunit 14
Authors:Wu, B, Chen, G, Chen, Y.
Deposit date:2020-01-15
Release date:2020-08-05
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Taf14 recognizes a common motif in transcriptional machineries and facilitates their clustering by phase separation.
Nat Commun, 11, 2020
4I5T
DownloadVisualize
BU of 4i5t by Molmil
Crystal structure of yeast Ap4A phosphorylase Apa2
Descriptor: 5',5'''-P-1,P-4-tetraphosphate phosphorylase 2
Authors:Jiang, Y.L, Hou, W.T, Chen, Y, Zhou, C.Z.
Deposit date:2012-11-29
Release date:2013-05-08
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structures of yeast Apa2 reveal catalytic insights into a canonical AP4A phosphorylase of the histidine triad superfamily
J.Mol.Biol., 425, 2013
3ICL
DownloadVisualize
BU of 3icl by Molmil
X-Ray Structure of Protein (EAL/GGDEF domain protein) from M.capsulatus, Northeast Structural Genomics Consortium Target McR174C
Descriptor: EAL/GGDEF domain protein, SULFATE ION
Authors:Kuzin, A, Chen, Y, Seetharaman, J, Mao, M, Xiao, R, Ciccosanti, C, Foote, E.L, Wang, H, Everett, J.K, Nair, R, Acton, T.B, Rost, B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-07-17
Release date:2009-08-04
Last modified:2021-10-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Northeast Structural Genomics Consortium Target McR174C
To be Published
3K9R
DownloadVisualize
BU of 3k9r by Molmil
X-ray structure of the Rhodanese-like domain of the Alr3790 protein from Anabaena sp. Northeast Structural Genomics Consortium Target NsR437c.
Descriptor: Alr3790 protein
Authors:Vorobiev, S, Chen, Y, Seetharaman, J, Maglaqui, M, Ciccosanti, C, Mao, L, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG)
Deposit date:2009-10-16
Release date:2009-10-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:X-ray structure of the Rhodanese-like domain of the Alr3790 protein from Anabaena sp.
To be Published
5EKI
DownloadVisualize
BU of 5eki by Molmil
Crystal Structure of Truncated CCL21
Descriptor: C-C motif chemokine 21, SULFATE ION
Authors:Lewandowski, E.M, Smith, E.W, Chen, Y.
Deposit date:2015-11-03
Release date:2016-10-05
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystallographic Structure of Truncated CCL21 and the Putative Sulfotyrosine-Binding Site.
Biochemistry, 55, 2016
5GOR
DownloadVisualize
BU of 5gor by Molmil
Crystal structure of alkaline invertase InvA from Anabaena sp. PCC 7120
Descriptor: Alkaline Invertase, GLYCEROL, SULFATE ION
Authors:Xie, J, Cai, K, Hu, H.X, Jiang, Y.L, Yang, F, Hu, P.F, Chen, Y, Zhou, C.Z.
Deposit date:2016-07-28
Release date:2016-11-02
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.673 Å)
Cite:Structural Analysis of the Catalytic Mechanism and Substrate Specificity of Anabaena Alkaline Invertase InvA Reveals a Novel Glucosidase
J. Biol. Chem., 291, 2016

222415

PDB entries from 2024-07-10

PDB statisticsPDBj update infoContact PDBjnumon