Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
5IYD
DownloadVisualize
BU of 5iyd by Molmil
Human core-PIC in the initial transcribing state (no IIS)
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ...
Authors:He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E.
Deposit date:2016-03-24
Release date:2016-05-18
Last modified:2019-11-20
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Near-atomic resolution visualization of human transcription promoter opening.
Nature, 533, 2016
4RNG
DownloadVisualize
BU of 4rng by Molmil
Crystal structure of a bacterial homologue of SWEET transporters
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, MtN3/saliva family, SULFATE ION
Authors:Hu, Q, Wang, J, Yan, C, Yan, N.
Deposit date:2014-10-24
Release date:2014-11-19
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of a bacterial homologue of SWEET transporters.
Cell Res., 24, 2014
4RHW
DownloadVisualize
BU of 4rhw by Molmil
Crystal structure of Apaf-1 CARD and caspase-9 CARD complex
Descriptor: Apoptotic protease-activating factor 1, CHLORIDE ION, Caspase-9, ...
Authors:Hu, Q, Wu, D, Yan, C, Shi, Y.
Deposit date:2014-10-03
Release date:2014-10-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular determinants of caspase-9 activation by the Apaf-1 apoptosome.
Proc. Natl. Acad. Sci. U.S.A., 111, 2014
4M69
DownloadVisualize
BU of 4m69 by Molmil
Crystal structure of the mouse RIP3-MLKL complex
Descriptor: CHLORIDE ION, MAGNESIUM ION, Mixed lineage kinase domain-like protein, ...
Authors:Xie, T, Peng, W, Yan, C, Wu, J, Shi, Y.
Deposit date:2013-08-09
Release date:2013-10-16
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.497 Å)
Cite:Structural Insights into RIP3-Mediated Necroptotic Signaling
Cell Rep, 5, 2013
4DNW
DownloadVisualize
BU of 4dnw by Molmil
Crystal structure of UVB-resistance protein UVR8
Descriptor: AT5g63860/MGI19_6
Authors:Wu, D, Hu, Q, Yan, Z, Chen, W, Yan, C, Wang, J, Shi, Y.
Deposit date:2012-02-09
Release date:2012-03-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.773 Å)
Cite:Structural basis of ultraviolet-B perception by UVR8.
Nature, 484, 2012
4DNV
DownloadVisualize
BU of 4dnv by Molmil
Crystal structure of the W285F mutant of UVB-resistance protein UVR8
Descriptor: AT5g63860/MGI19_6
Authors:Wu, D, Hu, Q, Yan, Z, Chen, W, Yan, C, Zhang, J, Wang, J, Shi, Y.
Deposit date:2012-02-09
Release date:2012-03-07
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.999 Å)
Cite:Structural basis of ultraviolet-B perception by UVR8.
Nature, 484, 2012
4R12
DownloadVisualize
BU of 4r12 by Molmil
Crystal structure of the gamma-secretase component Nicastrin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Xie, T, Yan, C, Zhou, R, Zhao, Y, Sun, L, Yang, G, Lu, P, Ma, D, Shi, Y.
Deposit date:2014-08-03
Release date:2014-09-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of the gamma-secretase component nicastrin.
Proc.Natl.Acad.Sci.USA, 111, 2014
4UIS
DownloadVisualize
BU of 4uis by Molmil
The cryoEM structure of human gamma-Secretase complex
Descriptor: GAMMA-SECRETASE, LYSOZYME
Authors:Sun, L, Zhao, L, Yang, G, Yan, C, Zhou, R, Zhou, X, Xie, T, Zhao, Y, Wu, S, Li, X, Shi, Y.
Deposit date:2015-04-03
Release date:2015-06-10
Last modified:2017-08-02
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:Structural Basis of Human Gamma-Secretase Assembly.
Proc.Natl.Acad.Sci.USA, 112, 2015
5A63
DownloadVisualize
BU of 5a63 by Molmil
Cryo-EM structure of the human gamma-secretase complex at 3.4 angstrom resolution.
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Bai, X, Yan, C, Yang, G, Lu, P, Ma, D, Sun, L, Zhou, R, Scheres, S.H.W, Shi, Y.
Deposit date:2015-06-24
Release date:2015-08-05
Last modified:2020-07-29
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:An Atomic Structure of Human Gamma-Secretase
Nature, 525, 2015
4DNU
DownloadVisualize
BU of 4dnu by Molmil
Crystal structure of the W285A mutant of UVB-resistance protein UVR8
Descriptor: AT5g63860/MGI19_6
Authors:Wu, D, Hu, Q, Yan, Z, Chen, W, Yan, C, Zhang, J, Wang, J, Shi, Y.
Deposit date:2012-02-09
Release date:2012-03-07
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.764 Å)
Cite:Structural basis of ultraviolet-B perception by UVR8.
Nature, 484, 2012
3J8H
DownloadVisualize
BU of 3j8h by Molmil
Structure of the rabbit ryanodine receptor RyR1 in complex with FKBP12 at 3.8 Angstrom resolution
Descriptor: Peptidyl-prolyl cis-trans isomerase FKBP1A, Ryanodine receptor 1, ZINC ION
Authors:Yan, Z, Bai, X, Yan, C, Wu, J, Scheres, S.H.W, Shi, Y, Yan, N.
Deposit date:2014-10-26
Release date:2014-12-10
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Structure of the rabbit ryanodine receptor RyR1 at near-atomic resolution.
Nature, 517, 2015
3RT0
DownloadVisualize
BU of 3rt0 by Molmil
Crystal structure of PYL10-HAB1 complex in the absence of abscisic acid (ABA)
Descriptor: Abscisic acid receptor PYL10, MAGNESIUM ION, Protein phosphatase 2C 16
Authors:Hao, Q, Yin, P, Li, W, Wang, L, Yan, C, Wang, J, Yan, N.
Deposit date:2011-05-02
Release date:2011-06-22
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.113 Å)
Cite:The Molecular Basis of ABA-Independent Inhibition of PP2Cs by a Subclass of PYL Proteins
Mol.Cell, 42, 2011
3RT2
DownloadVisualize
BU of 3rt2 by Molmil
Crystal structure of apo-PYL10
Descriptor: Abscisic acid receptor PYL10
Authors:Hao, Q, Yin, P, Li, W, Wang, L, Yan, C, Wang, J, Yan, N.
Deposit date:2011-05-02
Release date:2011-06-22
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:The Molecular Basis of ABA-Independent Inhibition of PP2Cs by a Subclass of PYL Proteins
Mol.Cell, 42, 2011
8Z1L
DownloadVisualize
BU of 8z1l by Molmil
Cryo-EM structure of human norepinephrine transporter NET in the presence of the antidepressant atomoxetine in an outward-open state at resolution of 3.4 angstrom.
Descriptor: (3R)-N-methyl-3-(2-methylphenoxy)-3-phenyl-propan-1-amine, CHLORIDE ION, Sodium-dependent noradrenaline transporter
Authors:Tan, J, Xiao, Y, Kong, F, Lei, J, Yuan, Y, Yan, C.
Deposit date:2024-04-11
Release date:2024-07-31
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Molecular basis of human noradrenaline transporter reuptake and inhibition.
Nature, 632, 2024
3NS2
DownloadVisualize
BU of 3ns2 by Molmil
High-resolution structure of pyrabactin-bound PYL2
Descriptor: 4-bromo-N-(pyridin-2-ylmethyl)naphthalene-1-sulfonamide, Abscisic acid receptor PYL2
Authors:Hao, Q, Yin, P, Yan, C, Yuan, X, Wang, J, Yan, N.
Deposit date:2010-07-01
Release date:2010-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.634 Å)
Cite:Single amino acid alteration between Valine and Isoleucine determines the distinct pyrabactin selectivity by PYL1 and PYL2
J.Biol.Chem., 285, 2010
6LT0
DownloadVisualize
BU of 6lt0 by Molmil
cryo-EM structure of C9ORF72-SMCR8-WDR41
Descriptor: Guanine nucleotide exchange C9orf72, Guanine nucleotide exchange protein SMCR8, WD repeat-containing protein 41
Authors:Tang, D, Sheng, J, Xu, L, Zhan, X, Yan, C, Qi, S.
Deposit date:2020-01-21
Release date:2020-04-15
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structure of C9ORF72-SMCR8-WDR41 reveals the role as a GAP for Rab8a and Rab11a.
Proc.Natl.Acad.Sci.USA, 117, 2020
7Y5X
DownloadVisualize
BU of 7y5x by Molmil
CryoEM structure of PS2-containing gamma-secretase treated with MRK-560
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Guo, X, Wang, Y, Zhou, J, Jin, C, Wang, J, Jia, B, Jing, D, Yan, C, Lei, J, Zhou, R, Shi, Y.
Deposit date:2022-06-17
Release date:2022-11-02
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Molecular basis for isoform-selective inhibition of presenilin-1 by MRK-560.
Nat Commun, 13, 2022
7Y5T
DownloadVisualize
BU of 7y5t by Molmil
CryoEM structure of PS1-containing gamma-secretase in complex with MRK-560
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Guo, X, Wang, Y, Zhou, J, Jin, C, Wang, J, Jia, B, Jing, D, Yan, C, Lei, J, Zhou, R, Shi, Y.
Deposit date:2022-06-17
Release date:2022-11-02
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Molecular basis for isoform-selective inhibition of presenilin-1 by MRK-560.
Nat Commun, 13, 2022
7Y5Z
DownloadVisualize
BU of 7y5z by Molmil
CryoEM structure of human PS2-containing gamma-secretase
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Guo, X, Wang, Y, Zhou, J, Jin, C, Wang, J, Jia, B, Jing, D, Yan, C, Lei, J, Zhou, R, Shi, Y.
Deposit date:2022-06-18
Release date:2022-11-02
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Molecular basis for isoform-selective inhibition of presenilin-1 by MRK-560.
Nat Commun, 13, 2022
5IY7
DownloadVisualize
BU of 5iy7 by Molmil
Human holo-PIC in the open state
Descriptor: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB10, DNA-directed RNA polymerase II subunit RPB11-a, ...
Authors:He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E.
Deposit date:2016-03-24
Release date:2016-05-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (8.6 Å)
Cite:Near-atomic resolution visualization of human transcription promoter opening.
Nature, 533, 2016
5IVW
DownloadVisualize
BU of 5ivw by Molmil
Human core TFIIH bound to DNA within the PIC
Descriptor: General transcription factor IIH subunit 2, General transcription factor IIH subunit 3, General transcription factor IIH subunit 4, ...
Authors:He, Y, Yan, C, Fang, J, Inouye, C, Tjian, R, Ivanov, I, Nogales, E.
Deposit date:2016-03-21
Release date:2016-05-18
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Near-atomic resolution visualization of human transcription promoter opening.
Nature, 533, 2016
6LYY
DownloadVisualize
BU of 6lyy by Molmil
Cryo-EM structure of the human MCT1/Basigin-2 complex in the presence of anti-cancer drug candidate AZD3965 in the outward-open conformation.
Descriptor: 3-methyl-5-[[(4~{R})-4-methyl-4-oxidanyl-1,2-oxazolidin-2-yl]carbonyl]-6-[[5-methyl-3-(trifluoromethyl)-1~{H}-pyrazol-4-yl]methyl]-1-propan-2-yl-thieno[2,3-d]pyrimidine-2,4-dione, Basigin, Monocarboxylate transporter 1
Authors:Wang, N, Jiang, X, Zhang, S, Zhu, A, Yuan, Y, Lei, J, Yan, C.
Deposit date:2020-02-16
Release date:2020-12-23
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structural basis of human monocarboxylate transporter 1 inhibition by anti-cancer drug candidates.
Cell, 184, 2021
6WGI
DownloadVisualize
BU of 6wgi by Molmil
Atomic model of the mutant OCCM (ORC-Cdc6-Cdt1-Mcm2-7 with Mcm6 WHD truncation) loaded on DNA at 10.5 A resolution
Descriptor: Cell division control protein 6, Cell division cycle protein CDT1, DNA (34-MER), ...
Authors:Yuan, Z, Schneider, S, Dodd, T, Riera, A, Bai, L, Yan, C, Magdalou, I, Ivanov, I, Stillman, B, Li, H, Speck, C.
Deposit date:2020-04-05
Release date:2020-07-15
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (10 Å)
Cite:Structural mechanism of helicase loading onto replication origin DNA by ORC-Cdc6.
Proc.Natl.Acad.Sci.USA, 117, 2020
6WGG
DownloadVisualize
BU of 6wgg by Molmil
Atomic model of pre-insertion mutant OCCM-DNA complex(ORC-Cdc6-Cdt1-Mcm2-7 with Mcm6 WHD truncation)
Descriptor: Cell division control protein 6, Cell division cycle protein CDT1, DNA (41-MER), ...
Authors:Yuan, Z, Schneider, S, Dodd, T, Riera, A, Bai, L, Yan, C, Magdalou, I, Ivanov, I, Stillman, B, Li, H, Speck, C.
Deposit date:2020-04-05
Release date:2020-07-15
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (8.1 Å)
Cite:Structural mechanism of helicase loading onto replication origin DNA by ORC-Cdc6.
Proc.Natl.Acad.Sci.USA, 117, 2020
6WGC
DownloadVisualize
BU of 6wgc by Molmil
Atomic model of semi-attached mutant OCCM-DNA complex (ORC-Cdc6-Cdt1-Mcm2-7 with Mcm6 WHD truncation)
Descriptor: Cell division control protein 6, DNA (41-MER), DNA replication licensing factor MCM3, ...
Authors:Yuan, Z, Schneider, S, Dodd, T, Riera, A, Bai, L, Yan, C, Magdalou, I, Ivanov, I, Stillman, B, Li, H, Speck, C.
Deposit date:2020-04-05
Release date:2020-07-15
Last modified:2024-03-06
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural mechanism of helicase loading onto replication origin DNA by ORC-Cdc6.
Proc.Natl.Acad.Sci.USA, 117, 2020

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon