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1TS8
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BU of 1ts8 by Molmil
Structure of the pR cis planar intermediate from time-resolved Laue crystallography
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Ihee, H, Rajagopal, S, Srajer, V, Pahl, R, Anderson, S, Schmidt, M, Schotte, F, Anfinrud, P.A, Wulff, M, Moffat, K.
Deposit date:2004-06-21
Release date:2005-07-05
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1TS7
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BU of 1ts7 by Molmil
Structure of the pR cis wobble and pR E46Q intermediates from time-resolved Laue crystallography
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Ihee, H, Rajagopal, S, Srajer, V, Pahl, R, Anderson, S, Schmidt, M, Schotte, F, Anfinrud, P.A, Wulff, M, Moffat, K.
Deposit date:2004-06-21
Release date:2005-07-05
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds.
Proc.Natl.Acad.Sci.Usa, 102, 2005
1S4R
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BU of 1s4r by Molmil
Structure of a reaction intermediate in the photocycle of PYP extracted by a SVD-driven analysis
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Schmidt, M, Pahl, R, Srajer, V, Anderson, S, Ren, Z, Ihee, H, Rajagopal, S, Moffat, K.
Deposit date:2004-01-17
Release date:2004-04-13
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Protein kinetics: Structures of intermediates and reaction mechanism from time-resolved x-ray data
Proc.Natl.Acad.Sci.USA, 101, 2004
1S1Y
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BU of 1s1y by Molmil
Photoactivated chromophore conformation in Photoactive Yellow Protein (E46Q mutant) from 10 microseconds to 3 milliseconds
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Anderson, S, Srajer, V, Pahl, R, Rajagopal, S, Schotte, F, Anfinrud, P, Wulff, M, Moffat, K.
Deposit date:2004-01-07
Release date:2004-06-15
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Chromophore conformation and the evolution of tertiary structural changes in photoactive yellow protein
Structure, 12, 2004
1S1Z
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BU of 1s1z by Molmil
Photoactivated chromophore conformation in Photoactive Yellow Protein (E46Q mutant) from 10 to 500 nanoseconds
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive Yellow Protein
Authors:Anderson, S, Srajer, V, Pahl, R, Rajagopal, S, Schotte, F, Anfinrud, P, Wulff, M, Moffat, K.
Deposit date:2004-01-07
Release date:2004-06-15
Last modified:2021-10-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Chromophore conformation and the evolution of tertiary structural changes in photoactive yellow protein
Structure, 12, 2004
3F72
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BU of 3f72 by Molmil
Crystal Structure of the Staphylococcus aureus pI258 CadC Metal Binding Site 2 Mutant
Descriptor: Cadmium efflux system accessory protein, SODIUM ION
Authors:Kandegedara, A, Thiyagarajan, S, Kondapalli, K.C, Stemmler, T.L, Rosen, B.P.
Deposit date:2008-11-07
Release date:2009-04-07
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Role of bound Zn(II) in the CadC Cd(II)/Pb(II)/Zn(II)-responsive repressor.
J.Biol.Chem., 284, 2009
4LNV
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BU of 4lnv by Molmil
Crystal Structure of TEP1s
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Thioester-containing protein I
Authors:Le, B.V, Williams, M, Logarajah, S, Baxter, R.H.G.
Deposit date:2013-07-12
Release date:2013-07-24
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Molecular basis for genetic resistance of Anopheles gambiae to Plasmodium: structural analysis of TEP1 susceptible and resistant alleles.
Plos Pathog., 8, 2012
1TS0
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BU of 1ts0 by Molmil
Structure of the pB1 intermediate from time-resolved Laue crystallography
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Ihee, H, Rajagopal, S, Srajer, V, Pahl, R, Anderson, S, Schmidt, M, Schotte, F, Anfinrud, P.A, Wulff, M, Moffat, K.
Deposit date:2004-06-21
Release date:2005-07-05
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds.
Proc.Natl.Acad.Sci.Usa, 102, 2005
4KX6
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BU of 4kx6 by Molmil
Plasticity of the quinone-binding site of the complex II homolog quinol:fumarate reductase
Descriptor: FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Singh, P.K, Sarwar, M, Maklashina, E, Kotlyar, V, Rajagukguk, S, Tomasiak, T.M, Cecchini, G, Iverson, T.M.
Deposit date:2013-05-24
Release date:2013-07-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Plasticity of the Quinone-binding Site of the Complex II Homolog Quinol:Fumarate Reductase.
J.Biol.Chem., 288, 2013
1TS6
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BU of 1ts6 by Molmil
Structure of the pB2 intermediate from time-resolved Laue crystallography
Descriptor: 4'-HYDROXYCINNAMIC ACID, Photoactive yellow protein
Authors:Ihee, H, Rajagopal, S, Srajer, V, Pahl, R, Anderson, S, Schmidt, M, Schotte, F, Anfinrud, P.A, Wulff, M, Moffat, K.
Deposit date:2004-06-21
Release date:2005-07-05
Last modified:2021-07-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Visualizing reaction pathways in photoactive yellow protein from nanoseconds to seconds.
Proc.Natl.Acad.Sci.Usa, 102, 2005
4D94
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BU of 4d94 by Molmil
Crystal Structure of TEP1r
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, ...
Authors:Le, B.V, Williams, M, Logarajah, S, Baxter, R.H.G.
Deposit date:2012-01-11
Release date:2012-10-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Molecular Basis for Genetic Resistance of Anopheles gambiae to Plasmodium: Structural Analysis of TEP1 Susceptible and Resistant Alleles.
Plos Pathog., 8, 2012
2HTO
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BU of 2hto by Molmil
Ruthenium hexammine ion interactions with Z-DNA
Descriptor: DNA (5'-D(*DCP*DGP*DCP*DGP*DCP*DA)-3'), DNA (5'-D(*DTP*DGP*DCP*DGP*DCP*DG)-3'), RUTHENIUM (III) HEXAAMINE ION
Authors:Bharanidharan, D, Thiyagarajan, S, Gautham, N.
Deposit date:2006-07-26
Release date:2006-08-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Hexammineruthenium(III) ion interactions with Z-DNA
Acta Crystallogr.,Sect.F, 63, 2007
2HTT
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BU of 2htt by Molmil
Ruthenium Hexammine ion interactions with Z-DNA
Descriptor: DNA (5'-D(*DCP*DGP*DCP*DGP*DCP*DA)-3'), DNA (5'-D(*DTP*DGP*DCP*DGP*DCP*DG)-3'), DNA (5'-D(P*DTP*DG)-3'), ...
Authors:Bharanidharan, D, Thiyagarajan, S, Gautham, N.
Deposit date:2006-07-26
Release date:2006-08-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Hexammineruthenium(III) ion interactions with Z-DNA
Acta Crystallogr.,Sect.F, 63, 2007
4HF2
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BU of 4hf2 by Molmil
Crystal Structure of E43A IscR mutant bound to its promoter
Descriptor: DNA (29-MER), HTH-type transcriptional regulator IscR
Authors:Rajagopalan, S.R, Phillips, K.J.
Deposit date:2012-10-04
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:Studies of IscR reveal a unique mechanism for metal-dependent regulation of DNA binding specificity.
Nat.Struct.Mol.Biol., 20, 2013
4HF1
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BU of 4hf1 by Molmil
Crystal Structure of IscR bound to its promoter
Descriptor: DNA (29-MER), HTH-type transcriptional regulator IscR
Authors:Rajagopalan, S.R, Phillips, K.J.
Deposit date:2012-10-04
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.222 Å)
Cite:Studies of IscR reveal a unique mechanism for metal-dependent regulation of DNA binding specificity.
Nat.Struct.Mol.Biol., 20, 2013
4HF0
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BU of 4hf0 by Molmil
Crystal Structure of Apo IscR
Descriptor: HTH-type transcriptional regulator IscR, SULFATE ION
Authors:Rajagopalan, S.R, Phillips, K.J.
Deposit date:2012-10-04
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Studies of IscR reveal a unique mechanism for metal-dependent regulation of DNA binding specificity.
Nat.Struct.Mol.Biol., 20, 2013
4QVE
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BU of 4qve by Molmil
Crystal structure of Bcl-xL in complex with BID BH3 domain
Descriptor: Bcl-2-like protein 1, IMIDAZOLE, Peptide from BH3-interacting domain death agonist
Authors:Sreekanth, R, Yoon, H.S.
Deposit date:2014-07-14
Release date:2015-06-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Bh3 induced conformational changes in Bcl-Xl revealed by crystal structure and comparative analysis.
Proteins, 83, 2015
5Y41
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BU of 5y41 by Molmil
Crystal Structure of LIGAND-BOUND NURR1-LBD
Descriptor: (13E,15S)-15-hydroxy-9-oxoprosta-10,13-dien-1-oic acid, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Sreekanth, R, Lescar, J, Yoon, H.S.
Deposit date:2017-07-31
Release date:2018-12-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:PGE1 and PGA1 bind to Nurr1 and activate its transcriptional function.
Nat.Chem.Biol., 2020
5MHH
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BU of 5mhh by Molmil
Crystal structure of engineered human lipocalin 2 carrying p-boronophenylalanine at position 36
Descriptor: Neutrophil gelatinase-associated lipocalin, SULFATE ION
Authors:Skerra, A, Eichinger, A.
Deposit date:2016-11-24
Release date:2017-10-11
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Rational Design of an Anticalin-Type Sugar-Binding Protein Using a Genetically Encoded Boronate Side Chain.
ACS Synth Biol, 6, 2017
5YD6
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BU of 5yd6 by Molmil
Crystal structure of PG-bound Nurr1-LBD
Descriptor: (~{Z})-7-[(1~{R},5~{S})-2-oxidanylidene-5-[(~{E},3~{S})-3-oxidanyloct-1-enyl]cyclopent-3-en-1-yl]hept-5-enoic acid, MAGNESIUM ION, Nuclear receptor subfamily 4 group A member 2
Authors:Sreekanth, R, Yoon, H.S.
Deposit date:2017-09-11
Release date:2019-03-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Structure of Nurr1 bound to cyclopentenone prostaglandin A2 and its mechanism of action in ameliorating dopaminergic neurodegeneration in Drosophila
To Be Published
4JYS
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BU of 4jys by Molmil
Crystal structure of FKBP25 from Plasmodium Vivax
Descriptor: CHLORIDE ION, IMIDAZOLE, Peptidyl-prolyl cis-trans isomerase
Authors:Sreekanth, R, Yoon, H.S.
Deposit date:2013-04-01
Release date:2014-02-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of Plasmodium vivax FK506-binding protein 25 reveals conformational changes responsible for its noncanonical activity
Proteins, 82, 2014
4PPI
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BU of 4ppi by Molmil
Crystal structure of Bcl-xL hexamer
Descriptor: Bcl-2-like protein 1, GLYCEROL
Authors:Sreekanth, R, Yoon, H.S.
Deposit date:2014-02-27
Release date:2015-03-04
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.851 Å)
Cite:Structural transition in Bcl-xL and its potential association with mitochondrial calcium ion transport
Sci Rep, 5, 2015
3UQI
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BU of 3uqi by Molmil
Crystallographic structure of FKBP12 from Aedes aegypti
Descriptor: 3[N-MORPHOLINO]PROPANE SULFONIC ACID, FKBP-type peptidyl-prolyl cis-trans isomerase, SULFATE ION
Authors:Sreekanth, R, Saw, K.Q, Yoon, H.S.
Deposit date:2011-11-20
Release date:2012-06-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.302 Å)
Cite:High-resolution crystal structure of FKBP12 from Aedes aegypti.
Protein Sci., 21, 2012
4QVF
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BU of 4qvf by Molmil
Crystal structure of Bcl-xL in complex with BIM BH3 domain
Descriptor: Bcl-2-like protein 1, Peptide from Bcl-2-like protein 11
Authors:Sreekanth, R, Yoon, H.S.
Deposit date:2014-07-15
Release date:2015-06-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.531 Å)
Cite:Bh3 induced conformational changes in Bcl-Xl revealed by crystal structure and comparative analysis.
Proteins, 83, 2015
2NZ7
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BU of 2nz7 by Molmil
Crystal Structure Analysis of Caspase-recruitment Domain (CARD) of Nod1
Descriptor: Caspase recruitment domain-containing protein 4
Authors:Thiagarajan, S, Robbins, S.L, Dubas, R.L, Park, Y.C.
Deposit date:2006-11-22
Release date:2007-12-04
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Monomer/dimer transition of the caspase-recruitment domain of human Nod1
Biochemistry, 47, 2008

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