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4IUQ
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BU of 4iuq by Molmil
crystal structure of SHH1 SAWADEE domain
Descriptor: CYMAL-4, SAWADEE HOMEODOMAIN HOMOLOG 1, ZINC ION
Authors:Du, J, Patel, D.J.
Deposit date:2013-01-21
Release date:2013-05-01
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.809 Å)
Cite:Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1.
Nature, 498, 2013
6DRJ
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BU of 6drj by Molmil
Structure of TRPM2 ion channel receptor by single particle electron cryo-microscopy, ADPR/Ca2+ bound state
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, CALCIUM ION, Transient receptor potential cation channel, ...
Authors:Du, J, Lu, W, Huang, Y, Winkler, P, Sun, W.
Deposit date:2018-06-12
Release date:2018-09-19
Last modified:2024-10-09
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Architecture of the TRPM2 channel and its activation mechanism by ADP-ribose and calcium.
Nature, 562, 2018
6DRK
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BU of 6drk by Molmil
Structure of TRPM2 ion channel receptor by single particle electron cryo-microscopy, Apo state
Descriptor: Transient receptor potential cation channel, subfamily M, member 2
Authors:Du, J, Lu, W, Huang, Y, Winkler, P, Sun, W.
Deposit date:2018-06-12
Release date:2018-09-19
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Architecture of the TRPM2 channel and its activation mechanism by ADP-ribose and calcium.
Nature, 562, 2018
5XO1
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BU of 5xo1 by Molmil
Crystal structure of the isochorismatase domain of VabB from Vibrio anguillarum 775
Descriptor: Isochorismate lyase
Authors:Ma, Q, Du, J.
Deposit date:2017-05-25
Release date:2018-05-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.23 Å)
Cite:Crystal structures of the isochorismatase domains from Vibrio anguillarum.
Biochem.Biophys.Res.Commun., 490, 2017
5XO0
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BU of 5xo0 by Molmil
Crystal structure of the isochorismatase domain of AngB from Vibrio anguillarum 775
Descriptor: Ischorismate lyase
Authors:Ma, Q, Du, J.
Deposit date:2017-05-25
Release date:2018-05-30
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structures of the isochorismatase domains from Vibrio anguillarum.
Biochem.Biophys.Res.Commun., 490, 2017
5IW5
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BU of 5iw5 by Molmil
Crystal structure of E. coli NudC in complex with NMN
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, NADH pyrophosphatase, ZINC ION
Authors:Li, S, Du, J, Patel, D.J.
Deposit date:2016-03-22
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Structure and function of the bacterial decapping enzyme NudC
Nat.Chem.Biol., 12, 2016
5IW4
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BU of 5iw4 by Molmil
Crystal structure of E. coli NudC in complex with NAD
Descriptor: NADH pyrophosphatase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ZINC ION
Authors:Li, S, Du, J, Patel, D.J.
Deposit date:2016-03-22
Release date:2016-07-13
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure and function of the bacterial decapping enzyme NudC.
Nat.Chem.Biol., 12, 2016
6LQE
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BU of 6lqe by Molmil
Crystal structure of Arabidopsis ARID5 PHD finger in complex with H3K4me3 peptide
Descriptor: 15-mer peptide from Histone H3.2, AT-rich interactive domain-containing protein 4, ZINC ION
Authors:Liu, R, Du, J.
Deposit date:2020-01-13
Release date:2020-06-03
Last modified:2020-08-19
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Dual Recognition of H3K4me3 and DNA by the ISWI Component ARID5 Regulates the Floral Transition in Arabidopsis.
Plant Cell, 32, 2020
6LQF
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BU of 6lqf by Molmil
Crystal structure of Arabidopsis ARID5 ARID-PHD cassette in complex with H3K4me3 peptide and DNA
Descriptor: 15-mer peptide from Histone H3.2, AT-rich interactive domain-containing protein 4, DNA (5'-D(*TP*TP*TP*AP*GP*AP*TP*CP*TP*AP*AP*A)-3'), ...
Authors:Liu, R, Du, J.
Deposit date:2020-01-13
Release date:2020-06-03
Last modified:2020-08-19
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Dual Recognition of H3K4me3 and DNA by the ISWI Component ARID5 Regulates the Floral Transition in Arabidopsis.
Plant Cell, 32, 2020
5IX2
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BU of 5ix2 by Molmil
Crystal structure of mouse Morc3 ATPase-CW cassette in complex with AMPPNP and unmodified H3 peptide
Descriptor: MAGNESIUM ION, MORC family CW-type zinc finger protein 3, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Li, S, Du, J, Patel, D.J.
Deposit date:2016-03-23
Release date:2016-08-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mouse MORC3 is a GHKL ATPase that localizes to H3K4me3 marked chromatin
Proc.Natl.Acad.Sci.USA, 113, 2016
9B94
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BU of 9b94 by Molmil
Cryo-EM structure of the E396A mutant of human TRPM4 in complex with calcium at 37 degrees Celsius
Descriptor: CALCIUM ION, Transient receptor potential cation channel subfamily M member 4
Authors:Hu, J, Lu, W, Du, J.
Deposit date:2024-04-01
Release date:2024-05-22
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Physiological temperature drives TRPM4 ligand recognition and gating.
Nature, 630, 2024
9B91
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BU of 9b91 by Molmil
Cryo-EM structure of the human TRPM4 channel subunit in complex with calcium and ATP at 37 degrees Celsius
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Transient receptor potential cation channel subfamily M member 4
Authors:Hu, J, Lu, W, Du, J.
Deposit date:2024-04-01
Release date:2024-05-15
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Physiological temperature drives TRPM4 ligand recognition and gating.
Nature, 630, 2024
9B90
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BU of 9b90 by Molmil
Cryo-EM structure of the human TRPM4 channel in complex with calcium and ATP at 37 degrees Celsius
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, Transient receptor potential cation channel subfamily M member 4
Authors:Hu, J, Lu, W, Du, J.
Deposit date:2024-04-01
Release date:2024-05-15
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Physiological temperature drives TRPM4 ligand recognition and gating.
Nature, 630, 2024
9B93
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BU of 9b93 by Molmil
Cryo-EM structure of the human TRPM4 channel in the presence of EDTA at 37 degrees Celsius
Descriptor: Transient receptor potential cation channel subfamily M member 4
Authors:Hu, J, Lu, W, Du, J.
Deposit date:2024-04-01
Release date:2024-05-15
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Physiological temperature drives TRPM4 ligand recognition and gating.
Nature, 630, 2024
9B8Z
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BU of 9b8z by Molmil
Cryo-EM structure of the human TRPM4 channel subunit in complex with calcium and decavanadate at 37 degrees Celsius
Descriptor: CALCIUM ION, DECAVANADATE, Transient receptor potential cation channel subfamily M member 4
Authors:Hu, J, Lu, W, Du, J.
Deposit date:2024-04-01
Release date:2024-05-15
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Physiological temperature drives TRPM4 ligand recognition and gating.
Nature, 630, 2024
9B8W
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BU of 9b8w by Molmil
Cryo-EM structure of the human TRPM4 in complex with calcium at 37 degrees Celsius
Descriptor: CALCIUM ION, Transient receptor potential cation channel subfamily M member 4
Authors:Hu, J, Lu, W, Du, J.
Deposit date:2024-04-01
Release date:2024-05-15
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Physiological temperature drives TRPM4 ligand recognition and gating.
Nature, 630, 2024
9B92
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BU of 9b92 by Molmil
Cryo-EM structure of the human TRPM4 in complex with calcium at 18 degrees Celsius
Descriptor: CALCIUM ION, Transient receptor potential cation channel subfamily M member 4
Authors:Hu, J, Lu, W, Du, J.
Deposit date:2024-04-01
Release date:2024-05-15
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Physiological temperature drives TRPM4 ligand recognition and gating.
Nature, 630, 2024
9B8X
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BU of 9b8x by Molmil
Cryo-EM structure of the human TRPM4 channel subunit in complex with calcium 37 degrees Celsius
Descriptor: CALCIUM ION, Transient receptor potential cation channel subfamily M member 4
Authors:Hu, J, Lu, W, Du, J.
Deposit date:2024-04-01
Release date:2024-05-15
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Physiological temperature drives TRPM4 ligand recognition and gating.
Nature, 630, 2024
9B8Y
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BU of 9b8y by Molmil
Cryo-EM structure of the human TRPM4 channel in complex with calcium and decavanadate at 37 degrees Celsius
Descriptor: CALCIUM ION, DECAVANADATE, Transient receptor potential cation channel subfamily M member 4
Authors:Hu, J, Lu, W, Du, J.
Deposit date:2024-04-01
Release date:2024-05-15
Last modified:2024-06-26
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Physiological temperature drives TRPM4 ligand recognition and gating.
Nature, 630, 2024
5WP6
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BU of 5wp6 by Molmil
Cryo-EM structure of a human TRPM4 channel in complex with calcium and decavanadate
Descriptor: DECAVANADATE, Transient receptor potential cation channel subfamily M member 4
Authors:Winkler, P.A, Huang, Y, Sun, W, Du, J, Lu, W.
Deposit date:2017-08-03
Release date:2017-12-13
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Electron cryo-microscopy structure of a human TRPM4 channel.
Nature, 552, 2017
6UIW
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BU of 6uiw by Molmil
Cryo-EM structure of human CALHM2 in a ruthenium red-bound inhibited state
Descriptor: Calcium homeostasis modulator protein 2, ruthenium(6+) azanide pentaamino(oxido)ruthenium (1/4/2)
Authors:Lu, W, Du, J, Choi, W.
Deposit date:2019-10-01
Release date:2019-11-27
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:The structures and gating mechanism of human calcium homeostasis modulator 2.
Nature, 576, 2019
6UIV
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BU of 6uiv by Molmil
Cryo-EM structure of human CALHM2 in an active/open state
Descriptor: Calcium homeostasis modulator protein 2
Authors:Lu, W, Du, J, Choi, W.
Deposit date:2019-10-01
Release date:2019-11-27
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:The structures and gating mechanism of human calcium homeostasis modulator 2.
Nature, 576, 2019
6UIX
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BU of 6uix by Molmil
Cryo-EM structure of human CALHM2 gap junction
Descriptor: Calcium homeostasis modulator protein 2
Authors:Lu, W, Du, J, Choi, W.
Deposit date:2019-10-01
Release date:2019-11-27
Last modified:2019-12-18
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:The structures and gating mechanism of human calcium homeostasis modulator 2.
Nature, 576, 2019
2F5J
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BU of 2f5j by Molmil
Crystal structure of MRG domain from human MRG15
Descriptor: Mortality factor 4-like protein 1
Authors:Zhang, P, Du, J, Ding, J.
Deposit date:2005-11-26
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The MRG domain of human MRG15 uses a shallow hydrophobic pocket to interact with the N-terminal region of PAM14
Protein Sci., 15, 2006
2F5K
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BU of 2f5k by Molmil
Crystal structure of the chromo domain of human MRG15
Descriptor: Mortality factor 4-like protein 1
Authors:Zhang, P, Du, J, Ding, J.
Deposit date:2005-11-26
Release date:2006-11-14
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of human MRG15 chromo domain and its binding to Lys36-methylated histone H3.
Nucleic Acids Res., 34, 2006

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