Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6OAO
DownloadVisualize
BU of 6oao by Molmil
Structure of DBP in complex with human neutralizing antibody 092096
Descriptor: Antibody 092096 single chain variable fragment, Duffy binding surface protein region II, SULFATE ION
Authors:Urusova, D, Tolia, N.H.
Deposit date:2019-03-18
Release date:2019-06-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.497 Å)
Cite:Structural basis for neutralization of Plasmodium vivax by naturally acquired human antibodies that target DBP.
Nat Microbiol, 4, 2019
8E1Z
DownloadVisualize
BU of 8e1z by Molmil
Crystal structure of Plasmodium falciparum ookinete surface antigen Pfs28
Descriptor: CHLORIDE ION, Ookinete surface protein Pfs28, SULFATE ION
Authors:Shukla, N, Tang, W.K, Tolia, N.H.
Deposit date:2022-08-12
Release date:2022-11-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural analysis of Plasmodium falciparum ookinete surface antigen Pfs28 relevant for malaria vaccine design.
Sci Rep, 12, 2022
8ER1
DownloadVisualize
BU of 8er1 by Molmil
X-ray crystal structure of Tet(X6)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent monooxygenase
Authors:Kumar, H, Tolia, N.H.
Deposit date:2022-10-11
Release date:2023-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of anhydrotetracycline-bound Tet(X6) reveals the mechanism for inhibition of type 1 tetracycline destructases.
Commun Biol, 6, 2023
8ER0
DownloadVisualize
BU of 8er0 by Molmil
X-ray crystal structure of Tet(X6) bound to anhydrotetracycline
Descriptor: 5A,6-ANHYDROTETRACYCLINE, FLAVIN-ADENINE DINUCLEOTIDE, Flavin-dependent monooxygenase
Authors:Kumar, H, Tolia, N.H.
Deposit date:2022-10-11
Release date:2023-04-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of anhydrotetracycline-bound Tet(X6) reveals the mechanism for inhibition of type 1 tetracycline destructases.
Commun Biol, 6, 2023
8EZM
DownloadVisualize
BU of 8ezm by Molmil
Pfs25 in complex with transmission-reducing antibody AS01-63
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 25 kDa ookinete surface antigen, SULFATE ION, ...
Authors:Shukla, N, Tang, W.K, Tolia, N.H.
Deposit date:2022-11-01
Release date:2023-08-16
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A human antibody epitope map of the malaria vaccine antigen Pfs25.
Npj Vaccines, 8, 2023
8EZK
DownloadVisualize
BU of 8ezk by Molmil
Pfs25 in complex with transmission-reducing antibody AS01-04
Descriptor: 25 kDa ookinete surface antigen, Transmission-reducing antibody AS01-4, single-chain Fv
Authors:Shukla, N, Tang, W.K, Tolia, N.H.
Deposit date:2022-11-01
Release date:2023-08-16
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A human antibody epitope map of the malaria vaccine antigen Pfs25.
Npj Vaccines, 8, 2023
8EZL
DownloadVisualize
BU of 8ezl by Molmil
Pfs25 in complex with transmission-reducing antibody AS01-50
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 25 kDa ookinete surface antigen, Transmission-reducing antibody AS01-50, ...
Authors:Shukla, N, Tang, W.K, Tolia, N.H.
Deposit date:2022-11-01
Release date:2023-08-16
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:A human antibody epitope map of the malaria vaccine antigen Pfs25.
Npj Vaccines, 8, 2023
4GF2
DownloadVisualize
BU of 4gf2 by Molmil
Crystal structure of Plasmodium falciparum Erythrocyte Binding Antigen 140 (PfEBA-140/BAEBL)
Descriptor: Erythrocyte binding antigen 140, GLYCEROL
Authors:Lin, D.H, Malpede, B.M, Batchelor, J.D, Tolia, N.H.
Deposit date:2012-08-02
Release date:2012-09-26
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal and Solution Structures of Plasmodium falciparum Erythrocyte-binding Antigen 140 Reveal Determinants of Receptor Specificity during Erythrocyte Invasion.
J.Biol.Chem., 287, 2012
5F3J
DownloadVisualize
BU of 5f3j by Molmil
Crystal structure of DBP in complex with inhibitory monoclonal antibody 2D10
Descriptor: Antibody 2D10 single chain variable fragment, Duffy receptor
Authors:Chen, E, Salinas, N.D, Tolia, N.H.
Deposit date:2015-12-02
Release date:2016-05-18
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (4.001 Å)
Cite:Broadly neutralizing epitopes in the Plasmodium vivax vaccine candidate Duffy Binding Protein.
Proc.Natl.Acad.Sci.USA, 113, 2016
7JGG
DownloadVisualize
BU of 7jgg by Molmil
Cryo-EM structure of P. falciparum VAR2CSA NF45 DBL5 and DBL6 domains at 4.88 A
Descriptor: Erythrocyte membrane protein 1
Authors:Ma, R, Tolia, N.H.
Deposit date:2020-07-19
Release date:2021-01-13
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (4.88 Å)
Cite:Structural basis for placental malaria mediated by Plasmodium falciparum VAR2CSA.
Nat Microbiol, 6, 2021
7JGF
DownloadVisualize
BU of 7jgf by Molmil
Cryo-EM structure of P. falciparum VAR2CSA FCR3 domains DBL5 and DBL6 at 4.69 A
Descriptor: Erythrocyte membrane protein 1
Authors:Ma, R, Tolia, N.H.
Deposit date:2020-07-19
Release date:2021-01-13
Last modified:2024-11-20
Method:ELECTRON MICROSCOPY (4.69 Å)
Cite:Structural basis for placental malaria mediated by Plasmodium falciparum VAR2CSA.
Nat Microbiol, 6, 2021
7JGE
DownloadVisualize
BU of 7jge by Molmil
Cryo-EM structure of P. falciparum VAR2CSA FCR3 core at 4 A
Descriptor: Erythrocyte membrane protein 1
Authors:Ma, R, Tolia, N.H.
Deposit date:2020-07-19
Release date:2021-01-13
Last modified:2024-11-13
Method:ELECTRON MICROSCOPY (4 Å)
Cite:Structural basis for placental malaria mediated by Plasmodium falciparum VAR2CSA.
Nat Microbiol, 6, 2021
7JGH
DownloadVisualize
BU of 7jgh by Molmil
Cryo-EM structure of P. falciparum VAR2CSA NF54 core in complex with CSA at 3.36 A
Descriptor: 2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose, Erythrocyte membrane protein 1, beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid-(1-3)-2-acetamido-2-deoxy-4-O-sulfo-beta-D-galactopyranose-(1-4)-beta-D-glucopyranuronic acid
Authors:Ma, R, Tolia, N.H.
Deposit date:2020-07-19
Release date:2021-01-13
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (3.36 Å)
Cite:Structural basis for placental malaria mediated by Plasmodium falciparum VAR2CSA.
Nat Microbiol, 6, 2021
7JGD
DownloadVisualize
BU of 7jgd by Molmil
Cryo-EM structure of P. falciparum VAR2CSA FCR3 core at 3.4 A
Descriptor: Erythrocyte membrane protein 1
Authors:Ma, R, Tolia, N.H.
Deposit date:2020-07-19
Release date:2021-01-13
Last modified:2024-11-06
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Structural basis for placental malaria mediated by Plasmodium falciparum VAR2CSA.
Nat Microbiol, 6, 2021
4ZEW
DownloadVisualize
BU of 4zew by Molmil
Crystal structure of PfHAD1 in complex with glucose-6-phosphate
Descriptor: 6-O-phosphono-alpha-D-glucopyranose, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Park, J, Tolia, N.H.
Deposit date:2015-04-20
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Cap-domain closure enables diverse substrate recognition by the C2-type haloacid dehalogenase-like sugar phosphatase Plasmodium falciparum HAD1.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
4ZEX
DownloadVisualize
BU of 4zex by Molmil
Crystal structure of PfHAD1 in complex with glyceraldehyde-3-phosphate
Descriptor: GLYCERALDEHYDE-3-PHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Park, J, Tolia, N.H.
Deposit date:2015-04-20
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Cap-domain closure enables diverse substrate recognition by the C2-type haloacid dehalogenase-like sugar phosphatase Plasmodium falciparum HAD1.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
4ZEV
DownloadVisualize
BU of 4zev by Molmil
Crystal structure of PfHAD1 in complex with mannose-6-phosphate
Descriptor: 6-O-phosphono-alpha-D-mannopyranose, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Park, J, Tolia, N.H.
Deposit date:2015-04-20
Release date:2015-09-09
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Cap-domain closure enables diverse substrate recognition by the C2-type haloacid dehalogenase-like sugar phosphatase Plasmodium falciparum HAD1.
Acta Crystallogr. D Biol. Crystallogr., 71, 2015
4QEX
DownloadVisualize
BU of 4qex by Molmil
Crystal structure of PfEBA-175 RII in complex with a Fab fragment from inhibitory antibody R217
Descriptor: Antibody Heavy Chain, Antibody Light Chain, Erythrocyte-binding antigen-175
Authors:Chen, E, Paing, M.M, Salinas, N, Sim, B.K, Tolia, N.H.
Deposit date:2014-05-19
Release date:2014-06-04
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (4.5 Å)
Cite:Structural and Functional Basis for Inhibition of Erythrocyte Invasion by Antibodies that Target Plasmodium falciparum EBA-175.
Plos Pathog., 9, 2013
1Z25
DownloadVisualize
BU of 1z25 by Molmil
Structure of P.furiosus Argonaute with bound Mn2+
Descriptor: Argonaute, MANGANESE (II) ION
Authors:Rivas, F.V, Tolia, N.H, Song, J.J, Aragon, J.P, Liu, J, Hannon, G.J, Joshua-Tor, L.
Deposit date:2005-03-07
Release date:2005-04-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Purified Argonaute2 and an siRNA form recombinant human RISC.
Nat.Struct.Mol.Biol., 12, 2005
1Z26
DownloadVisualize
BU of 1z26 by Molmil
Structure of Pyrococcus furiosus Argonaute with bound tungstate
Descriptor: Argonaute, TUNGSTATE(VI)ION
Authors:Rivas, F.V, Tolia, N.H, Song, J.J, Aragon, J.P, Liu, J, Hannon, G.J, Joshua-Tor, L.
Deposit date:2005-03-07
Release date:2005-04-05
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Purified Argonaute2 and an siRNA form recombinant human RISC.
Nat.Struct.Mol.Biol., 12, 2005
5TUM
DownloadVisualize
BU of 5tum by Molmil
Crystal structure of tetracycline destructase Tet(56)
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, tetracycline destructase Tet(56)
Authors:Park, J, Tolia, N.H.
Deposit date:2016-11-06
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.299 Å)
Cite:Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes.
Nat. Chem. Biol., 13, 2017
5TUF
DownloadVisualize
BU of 5tuf by Molmil
Crystal structure of tetracycline destructase Tet(50) in complex with anhydrotetracycline
Descriptor: 5A,6-ANHYDROTETRACYCLINE, FLAVIN-ADENINE DINUCLEOTIDE, SULFATE ION, ...
Authors:Park, J, Tolia, N.H.
Deposit date:2016-11-06
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes.
Nat. Chem. Biol., 13, 2017
5TUL
DownloadVisualize
BU of 5tul by Molmil
Crystal structure of tetracycline destructase Tet(55)
Descriptor: PHOSPHATE ION, Tetracycline destructase Tet(55)
Authors:Park, J, Tolia, N.H.
Deposit date:2016-11-06
Release date:2017-05-10
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (2 Å)
Cite:Plasticity, dynamics, and inhibition of emerging tetracycline resistance enzymes.
Nat. Chem. Biol., 13, 2017
7UFW
DownloadVisualize
BU of 7ufw by Molmil
Pfs230 D1D2 in complex with LMIV230-01
Descriptor: Gametocyte surface protein P230, LMIV230-01
Authors:Tang, W.K, Tolia, N.H.
Deposit date:2022-03-23
Release date:2023-02-15
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A human antibody epitope map of Pfs230D1 derived from analysis of individuals vaccinated with a malaria transmission-blocking vaccine.
Immunity, 56, 2023
7UA8
DownloadVisualize
BU of 7ua8 by Molmil
Pfs230 D1 domain in complex with 230AL-20
Descriptor: 230Al-20, Gametocyte surface protein P230
Authors:Tang, W.K, Tolia, N.H.
Deposit date:2022-03-11
Release date:2023-02-15
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:A human antibody epitope map of Pfs230D1 derived from analysis of individuals vaccinated with a malaria transmission-blocking vaccine.
Immunity, 56, 2023

227561

PDB entries from 2024-11-20

PDB statisticsPDBj update infoContact PDBjnumon