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2PK8
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BU of 2pk8 by Molmil
Crystal structure of an uncharacterized protein PF0899 from Pyrococcus furiosus
Descriptor: GOLD (I) CYANIDE ION, Uncharacterized protein PF0899
Authors:Liu, Z.J, Tempel, W, Chen, L, Shah, A, Lee, D, Clancy-Kelley, L.L, Dillard, B.D, Rose, J.P, Sugar, F.J, Jenny Jr, F.E, Lee, H.S, Izumi, M, Shah, C, Poole III, F.L, Adams, M.W.W, Richardson, J.S, Richardson, D.C, Wang, B.-C, Southeast Collaboratory for Structural Genomics (SECSG)
Deposit date:2007-04-17
Release date:2007-05-22
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of the hypothetical protein PF0899 from Pyrococcus furiosus at 1.85 A resolution.
Acta Crystallogr.,Sect.F, 63, 2007
9QOF
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BU of 9qof by Molmil
E.coli seryl-tRNA synthetase (Arm deletion mutant) bound to sulphamoyl seryl-adenylate analogue
Descriptor: 5'-O-(N-(L-SERYL)-SULFAMOYL)ADENOSINE, MAGNESIUM ION, SULFATE ION, ...
Authors:Cusack, S, Belrhali, H, Price, S, Leberman, R.
Deposit date:2025-03-26
Release date:2025-05-14
Method:X-RAY DIFFRACTION (2.32 Å)
Cite:Seryl-tRNA synthetase from Escherichia coli,implication of its N-terminal domain in aminoacylation activity and specificity.
Nucleic Acids Res, 22, 1994
6BX8
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BU of 6bx8 by Molmil
Human Mesotrypsin (PRSS3) Complexed with Tissue Factor Pathway Inhibitor Variant (TFPI1-KD1-K15R-I17C-I34C)
Descriptor: SULFATE ION, Tissue factor pathway inhibitor, Trypsin-3
Authors:Coban, M, Sankaran, B, Cohen, I, Hockla, A, Papo, N, Radisky, E.S.
Deposit date:2017-12-18
Release date:2019-02-06
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:Disulfide engineering of human Kunitz-type serine protease inhibitors enhances proteolytic stability and target affinity toward mesotrypsin.
J. Biol. Chem., 294, 2019
9BCM
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BU of 9bcm by Molmil
Crystal structure of the glycosyltransferase UGT95A1
Descriptor: Glycosyltransferase
Authors:Pereira, J.H, Sirirungruang, S, Shih, P.M, Adams, P.D.
Deposit date:2024-04-09
Release date:2024-08-07
Last modified:2024-09-04
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Structural and biochemical basis for regiospecificity of the flavonoid glycosyltransferase UGT95A1.
J.Biol.Chem., 300, 2024
9BEL
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BU of 9bel by Molmil
Tungstate binding protein (Tungbindin) from Eubacterium limosum with five Tungstates bound
Descriptor: Molybdenum-pterin binding domain-containing protein, SULFATE ION, TUNGSTATE(VI)ION
Authors:Zhou, D, Rose, J.P, Chen, L, Wang, B.C.
Deposit date:2024-04-15
Release date:2024-09-04
Last modified:2025-04-23
Method:X-RAY DIFFRACTION (2.68 Å)
Cite:Storage of the vital metal tungsten in a dominant SCFA-producing human gut microbe Eubacterium limosum and implications for other gut microbes.
Mbio, 16, 2025
6HLK
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BU of 6hlk by Molmil
Hijacking the Hijackers: Escherichia coli Pathogenicity Islands Redirect Helper Phage Packaging for Their Own Benefit.
Descriptor: Redirecting phage packaging protein C (RppC)
Authors:Penades, J.R, Bacarizo, J, Marina, A, Alqasmi, M, Fillol-Salom, A, Roszak, A.W, Ciges-Tomas, J.R.
Deposit date:2018-09-11
Release date:2019-07-31
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Hijacking the Hijackers: Escherichia coli Pathogenicity Islands Redirect Helper Phage Packaging for Their Own Benefit.
Mol.Cell, 75, 2019
9ONO
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BU of 9ono by Molmil
Fe-bound B. pseudomallei rubrerythrin
Descriptor: FE (III) ION, Rubrerythrin
Authors:Budziszewski, G.R, Snell, M.E, Monteiro, D.C.F, Lynch, M.L, Bowman, S.E.J.
Deposit date:2025-05-15
Release date:2025-06-25
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Burkholderia pseudomallei rubrerythrin promiscuously binds metals in a structurally pre-formed bimetallic binding site.
Biorxiv, 2025
9ONR
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BU of 9onr by Molmil
rubrerythrin- E53A E124A
Descriptor: DI(HYDROXYETHYL)ETHER, Rubrerythrin, THIOCYANATE ION
Authors:Budziszewski, G.R, Snell, M.E, Monteiro, D.C.F, Lynch, M.L, Bowman, S.E.J.
Deposit date:2025-05-15
Release date:2025-06-25
Method:X-RAY DIFFRACTION (1.38 Å)
Cite:Burkholderia pseudomallei rubrerythrin promiscuously binds metals in a structurally pre-formed bimetallic binding site.
Biorxiv, 2025
9ONN
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BU of 9onn by Molmil
Co-bound B. pseudomallei Rubrerythrin
Descriptor: COBALT (II) ION, Rubrerythrin
Authors:Budziszewski, G.R, Snell, M.E, Monteiro, D.C.F, Lynch, M.L, Bowman, S.E.J.
Deposit date:2025-05-15
Release date:2025-06-25
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Burkholderia pseudomallei rubrerythrin promiscuously binds metals in a structurally pre-formed bimetallic binding site.
Biorxiv, 2025
9ONM
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BU of 9onm by Molmil
near-apo rubrerythrin
Descriptor: DI(HYDROXYETHYL)ETHER, FE (III) ION, Rubrerythrin
Authors:Budziszewski, G.R, Snell, M.E, Monteiro, D.C.F, Lynch, M.L, Bowman, S.E.J.
Deposit date:2025-05-15
Release date:2025-06-25
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Burkholderia pseudomallei rubrerythrin promiscuously binds metals in a structurally pre-formed bimetallic binding site.
Biorxiv, 2025
9ONQ
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BU of 9onq by Molmil
Mn-bound B. pseudomallei rubrerythrin
Descriptor: MANGANESE (II) ION, Rubrerythrin
Authors:Budziszewski, G.R, Snell, M.E, Monteiro, D.C.F, Lynch, M.L, Bowman, S.E.J.
Deposit date:2025-05-15
Release date:2025-06-25
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Burkholderia pseudomallei rubrerythrin promiscuously binds metals in a structurally pre-formed bimetallic binding site.
Biorxiv, 2025
6XA9
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BU of 6xa9 by Molmil
SARS CoV-2 PLpro in complex with ISG15 C-terminal domain propargylamide
Descriptor: GLYCEROL, ISG15 CTD-propargylamide, Non-structural protein 3, ...
Authors:Klemm, T, Calleja, D.J, Richardson, L.W, Lechtenberg, B.C, Komander, D.
Deposit date:2020-06-04
Release date:2020-06-17
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Mechanism and inhibition of the papain-like protease, PLpro, of SARS-CoV-2.
Embo J., 39, 2020
7JY2
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BU of 7jy2 by Molmil
Z-DNA joint X-ray/Neutron
Descriptor: Chains: A,B
Authors:Harp, J.M, Coates, L, Egli, M.
Deposit date:2020-08-28
Release date:2021-04-28
Last modified:2024-04-03
Method:NEUTRON DIFFRACTION (1.5 Å), X-RAY DIFFRACTION
Cite:Water structure around a left-handed Z-DNA fragment analyzed by cryo neutron crystallography.
Nucleic Acids Res., 49, 2021
7JMC
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BU of 7jmc by Molmil
Sheep Connexin-50 at 2.5 angstroms resolution, Lipid Class 3
Descriptor: 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE, Gap junction alpha-8 protein
Authors:Flores, J.A, Haddad, B.G, Dolan, K.D, Myers, J.B, Yoshioka, C.C, Copperman, J, Zuckerman, D.M, Reichow, S.L.
Deposit date:2020-07-31
Release date:2020-09-09
Last modified:2024-10-23
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Connexin-46/50 in a dynamic lipid environment resolved by CryoEM at 1.9 angstrom.
Nat Commun, 11, 2020
8OVR
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BU of 8ovr by Molmil
Clostridium perfringens chitinase CP56_3454 apo form
Descriptor: Chitinase B, PIPERAZINE-N,N'-BIS(2-ETHANESULFONIC ACID), SODIUM ION, ...
Authors:Bloch, Y, Savvides, S.N.
Deposit date:2023-04-26
Release date:2023-07-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Clostridium perfringens chitinases, key enzymes during early stages of necrotic enteritis in broiler chickens.
Plos Pathog., 20, 2024
8OWF
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BU of 8owf by Molmil
Clostridium perfringens chitinase CP4_3455 with chitosan
Descriptor: 2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose-(1-4)-2-amino-2-deoxy-beta-D-glucopyranose, CHLORIDE ION, Chitodextrinase, ...
Authors:Bloch, Y, Savvides, S.N.
Deposit date:2023-04-27
Release date:2023-07-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Clostridium perfringens chitinases, key enzymes during early stages of necrotic enteritis in broiler chickens.
Plos Pathog., 20, 2024
8OXU
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BU of 8oxu by Molmil
Crystal Structure of the Hsp90-LA1011 Complex
Descriptor: ATP-dependent molecular chaperone HSP82, dimethyl 2,6-bis[2-(dimethylamino)ethyl]-1-methyl-4-[4-(trifluoromethyl)phenyl]-4~{H}-pyridine-3,5-dicarboxylate
Authors:Roe, S.M, Prodromou, C.
Deposit date:2023-05-02
Release date:2023-07-12
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.94 Å)
Cite:The Crystal Structure of the Hsp90-LA1011 Complex and the Mechanism by Which LA1011 May Improve the Prognosis of Alzheimer's Disease.
Biomolecules, 13, 2023
7JIZ
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BU of 7jiz by Molmil
Dienelactone hydrolase family protein ScDLH from Solimonas sp. K1W22B-7
Descriptor: Dienelactone hydrolase family protein
Authors:Schnettler Fernandez, J.D.F, Campbell, E.C, Hollfelder, F.H.
Deposit date:2020-07-24
Release date:2022-01-26
Last modified:2025-03-12
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:ScDLH
To Be Published
5MJG
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BU of 5mjg by Molmil
Single-shot pink beam serial crystallography: Thaumatin
Descriptor: S,R MESO-TARTARIC ACID, SODIUM ION, Thaumatin-1
Authors:Meents, A, Oberthuer, D, Lieske, J, Srajer, V.
Deposit date:2016-12-01
Release date:2017-12-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Single-shot pink beam serial crystallography: Thaumatin
To Be Published
8A58
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BU of 8a58 by Molmil
X-ray structure of TRIM21 RING E3 ligase in complex with E2 enzyme Ube2W
Descriptor: E3 ubiquitin-protein ligase TRIM21, Ubiquitin-conjugating enzyme E2 W, ZINC ION
Authors:James, L.C, Kiss, L.
Deposit date:2022-06-14
Release date:2023-04-26
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Trim-Away ubiquitinates and degrades lysine-less and N-terminally acetylated substrates.
Nat Commun, 14, 2023
9K0A
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BU of 9k0a by Molmil
Structure of Pictet-Spenglerases KslB in complex with product
Descriptor: (1~{S},3~{S})-1-(3-hydroxy-3-oxopropyl)-2,3,4,9-tetrahydropyrido[3,4-b]indole-1,3-dicarboxylic acid, Cucumopine synthase C-terminal helical bundle domain-containing protein, GLYCEROL
Authors:Mori, T, Renata, H, Abe, I.
Deposit date:2024-10-15
Release date:2025-06-18
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Structure of Pictet-Spenglerases KslB in complex with product
To Be Published
8A8L
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BU of 8a8l by Molmil
Crystal structure of a staphylococcal orthologue of CYP134A1 (CYPX) in complex with a heme-coordinated fragment
Descriptor: 6-methoxy-2,3,4,9-tetrahydro-1H-pyrido[3,4-b]indole, Cytochrome P450 protein, GLYCEROL, ...
Authors:Snee, M, Katariya, M, Levy, C.
Deposit date:2022-06-23
Release date:2023-07-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Crystal structure of a staphylococcal orthologue of CYP134A1 (CYPX) in complex with a heme-coordinated fragment
To Be Published
8A6W
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BU of 8a6w by Molmil
Crystal structure of CYP142 from Mycobacterium tuberculosis in complex with cholestenone
Descriptor: (8ALPHA,9BETA)-CHOLEST-4-EN-3-ONE, PROTOPORPHYRIN IX CONTAINING FE, Steroid C26-monooxygenase
Authors:Snee, M, Amadi, C, Levy, C.
Deposit date:2022-06-20
Release date:2023-07-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Crystal structure of CYP142 from Mycobacterium tuberculosis in complex with cholestenone
To Be Published
9MRF
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BU of 9mrf by Molmil
De novo designed apolar residue motif transmembrane helix
Descriptor: ApolarResidue_denovo_design_46727_KFYK, DI(HYDROXYETHYL)ETHER
Authors:Mravic, M, Zhang, M, Anderson, C.T.
Deposit date:2025-01-07
Release date:2025-01-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:De novo designed apolar residue motif transmembrane helix
To Be Published
9MDK
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BU of 9mdk by Molmil
Crystal Structure of E64-inhibited C0362 (TDE_0362 [TDE0362] resi 205-647)
Descriptor: 1,2-ETHANEDIOL, Bacterial Ig-like domain protein C0362, N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE
Authors:Clark, N.D, Malkowski, M.G.
Deposit date:2024-12-05
Release date:2025-02-12
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Structural insights into the role of the prosegment binding loop in a papain-superfamily cysteine protease from Treponema denticola.
Acta Crystallogr.,Sect.F, 81, 2025

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PDB entries from 2025-07-09

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