Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
2XTN
DownloadVisualize
BU of 2xtn by Molmil
Crystal structure of GTP-bound human GIMAP2, amino acid residues 1- 234
Descriptor: GTPASE IMAP FAMILY MEMBER 2, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION
Authors:Schwefel, D, Froehlich, C, Daumke, O.
Deposit date:2010-10-11
Release date:2010-10-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Basis of Oligomerization in Septin-Like Gtpase of Immunity-Associated Protein 2 (Gimap2)
Proc.Natl.Acad.Sci.USA, 107, 2010
2XTM
DownloadVisualize
BU of 2xtm by Molmil
Crystal structure of GDP-bound human GIMAP2, amino acid residues 1- 234
Descriptor: GLYCEROL, GTPASE IMAP FAMILY MEMBER 2, GUANOSINE-5'-DIPHOSPHATE, ...
Authors:Schwefel, D, Froehlich, C, Daumke, O.
Deposit date:2010-10-11
Release date:2010-10-20
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural Basis of Oligomerization in Septin-Like Gtpase of Immunity-Associated Protein 2 (Gimap2)
Proc.Natl.Acad.Sci.USA, 107, 2010
8QYA
DownloadVisualize
BU of 8qya by Molmil
J22.9-FNY, fully humanized, CDR optimized Fab Fragment based on chimeric J22.9-xi IgG against BCMA; with VH CDR2 glycosylation
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, J22.9-FNY Fab antibody heavy chain, ...
Authors:Marino, S.F, Daumke, O.
Deposit date:2023-10-25
Release date:2024-01-17
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Structure-based humanization of a therapeutic antibody for multiple myeloma.
J.Mol.Med., 102, 2024
7BI6
DownloadVisualize
BU of 7bi6 by Molmil
PI3KC2a core in complex with ATP
Descriptor: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Lo, W.T, Roske, Y, Daumke, O, Haucke, V.
Deposit date:2021-01-12
Release date:2022-03-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural basis of phosphatidylinositol 3-kinase C2 alpha function.
Nat.Struct.Mol.Biol., 29, 2022
7BI9
DownloadVisualize
BU of 7bi9 by Molmil
PI3KC2a core in complex with PIK90
Descriptor: 1,2-ETHANEDIOL, N-(2,3-DIHYDRO-7,8-DIMETHOXYIMIDAZO[1,2-C] QUINAZOLIN-5-YL)NICOTINAMIDE, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha,Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha
Authors:Lo, W.T, Roske, Y, Daumke, O, Haucke, V.
Deposit date:2021-01-12
Release date:2022-03-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Structural basis of phosphatidylinositol 3-kinase C2 alpha function.
Nat.Struct.Mol.Biol., 29, 2022
7BI4
DownloadVisualize
BU of 7bi4 by Molmil
PI3KC2a core apo
Descriptor: 1,2-ETHANEDIOL, Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha,Phosphatidylinositol 4-phosphate 3-kinase C2 domain-containing subunit alpha, SULFATE ION
Authors:Lo, W.T, Roske, Y, Daumke, O, Haucke, V.
Deposit date:2021-01-12
Release date:2022-03-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.42 Å)
Cite:Structural basis of phosphatidylinositol 3-kinase C2 alpha function.
Nat.Struct.Mol.Biol., 29, 2022
7BI2
DownloadVisualize
BU of 7bi2 by Molmil
PI3KC2aDeltaN and DeltaC-C2
Descriptor: 1,2-ETHANEDIOL, 9-(6-aminopyridin-3-yl)-1-[3-(trifluoromethyl)phenyl]benzo[h][1,6]naphthyridin-2(1H)-one, IODIDE ION, ...
Authors:Lo, W.T, Roske, Y, Daumke, O, Haucke, V.
Deposit date:2021-01-12
Release date:2022-03-09
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (3.25 Å)
Cite:Structural basis of phosphatidylinositol 3-kinase C2 alpha function.
Nat.Struct.Mol.Biol., 29, 2022
3SNH
DownloadVisualize
BU of 3snh by Molmil
Crystal structure of nucleotide-free human dynamin1
Descriptor: Dynamin-1
Authors:Faelber, K, Daumke, O.
Deposit date:2011-06-29
Release date:2011-09-21
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:Crystal structure of nucleotide-free dynamin.
Nature, 477, 2011
8QY9
DownloadVisualize
BU of 8qy9 by Molmil
J22.9-H, fully humanized Fab Fragment based on chimeric J22.9-xi IgG against BCMA
Descriptor: COPPER (II) ION, Fab heavy chain of J22.9-H, Fab light chain of J22.9-H, ...
Authors:Marino, S.F, Daumke, O.
Deposit date:2023-10-25
Release date:2024-01-17
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structure-based humanization of a therapeutic antibody for multiple myeloma.
J.Mol.Med., 102, 2024
8QYB
DownloadVisualize
BU of 8qyb by Molmil
J22.9-ISY, fully humanized and CDR optimized Fab Fragment based on chimeric J22.9-xi IgG against BCMA
Descriptor: COPPER (II) ION, Fab heavy chain of J22.9-ISY, Fab light chain of J22.9-ISY, ...
Authors:Marino, S.F, Daumke, O.
Deposit date:2023-10-25
Release date:2024-01-17
Last modified:2024-09-11
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Structure-based humanization of a therapeutic antibody for multiple myeloma.
J.Mol.Med., 102, 2024
5MTV
DownloadVisualize
BU of 5mtv by Molmil
Active structure of EHD4 complexed with ATP-gamma-S
Descriptor: EH domain-containing protein 4, MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
Authors:Melo, A.A, Daumke, O.
Deposit date:2017-01-10
Release date:2017-03-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.79 Å)
Cite:Structural insights into the activation mechanism of dynamin-like EHD ATPases.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4BEJ
DownloadVisualize
BU of 4bej by Molmil
Nucleotide-free Dynamin 1-like protein (DNM1L, DRP1, DLP1)
Descriptor: DYNAMIN 1-LIKE PROTEIN
Authors:Froehlich, C, Schwefel, D, Faelber, K, Daumke, O.
Deposit date:2013-03-11
Release date:2013-04-24
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.483 Å)
Cite:Structural Insights Into Oligomerization and Mitochondrial Remodelling of Dynamin 1-Like Protein.
Embo J., 32, 2013
3ZJC
DownloadVisualize
BU of 3zjc by Molmil
Crystal structure of GMPPNP-bound human GIMAP7 L100Q variant
Descriptor: GTPASE IMAP FAMILY MEMBER 7, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
Authors:Schwefel, D, Daumke, O.
Deposit date:2013-01-17
Release date:2013-03-13
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural Insights Into the Mechanism of Gtpase Activation in the Gimap Family.
Structure, 21, 2013
5MVF
DownloadVisualize
BU of 5mvf by Molmil
Active structure of EHD4 complexed with ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, EH domain-containing protein 4, MAGNESIUM ION
Authors:Melo, A.A, Daumke, O.
Deposit date:2017-01-16
Release date:2017-03-08
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.268 Å)
Cite:Structural insights into the activation mechanism of dynamin-like EHD ATPases.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5FPH
DownloadVisualize
BU of 5fph by Molmil
The GTPase domains of the immunity-related Irga6 dimerize in a parallel head-to-head fashion
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, INTERFERON-INDUCIBLE GTPASE 1, MAGNESIUM ION, ...
Authors:Schulte, K, Pawlowski, N, Faelber, K, Froehlich, C, Howard, J, Daumke, O.
Deposit date:2015-11-30
Release date:2016-02-10
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:The Immunity-Related Gtpase Irga6 Dimerizes in a Parallel Head-to-Head Fashion.
Bmc Biol., 14, 2016
6YGB
DownloadVisualize
BU of 6ygb by Molmil
Crystal structure of the NatC complex bound to CoA
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, COENZYME A, ...
Authors:Grunwald, S, Hopf, L, Bock-Bierbaum, T, Lally, C.C, Spahn, C.M.T, Daumke, O.
Deposit date:2020-03-27
Release date:2020-10-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.451 Å)
Cite:Divergent architecture of the heterotrimeric NatC complex explains N-terminal acetylation of cognate substrates.
Nat Commun, 11, 2020
6YGA
DownloadVisualize
BU of 6yga by Molmil
Crystal structure of the apo NatC complex
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Grunwald, S, Hopf, L, Bock-Bierbaum, T, Lally, C.C, Spahn, C.M.T, Daumke, O.
Deposit date:2020-03-27
Release date:2020-10-28
Last modified:2020-11-18
Method:X-RAY DIFFRACTION (2.397 Å)
Cite:Divergent architecture of the heterotrimeric NatC complex explains N-terminal acetylation of cognate substrates.
Nat Commun, 11, 2020
6YGD
DownloadVisualize
BU of 6ygd by Molmil
Crystal structure of the NatC complex bound to Gag peptide and CoA
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, COENZYME A, ...
Authors:Grunwald, S, Hopf, L, Bock-Bierbaum, T, Lally, C.C, Spahn, C.M.T, Daumke, O.
Deposit date:2020-03-27
Release date:2020-10-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.752 Å)
Cite:Divergent architecture of the heterotrimeric NatC complex explains N-terminal acetylation of cognate substrates.
Nat Commun, 11, 2020
5FSG
DownloadVisualize
BU of 5fsg by Molmil
Structure of the hantavirus nucleoprotein provides insights into the mechanism of RNA encapsidation and a template for drug design
Descriptor: MALTOSE-BINDING PERIPLASMIC PROTEIN, HANTAVIRUS NUCLEOPROTEIN, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Olal, D, Daumke, O.
Deposit date:2016-01-05
Release date:2016-04-06
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.209 Å)
Cite:Structure of the Hantavirus Nucleoprotein Provides Insights Into the Mechanism of RNA Encapsidation.
Cell Rep., 14, 2016
6YGC
DownloadVisualize
BU of 6ygc by Molmil
Crystal structure of the NatC complex bound to Arl3 peptide and CoA
Descriptor: ADP-ribosylation factor-like protein 3, CHLORIDE ION, COENZYME A, ...
Authors:Grunwald, S, Hopf, L, Bock-Bierbaum, T, Lally, C.C, Spahn, C.M.T, Daumke, O.
Deposit date:2020-03-27
Release date:2020-10-28
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.994 Å)
Cite:Divergent architecture of the heterotrimeric NatC complex explains N-terminal acetylation of cognate substrates.
Nat Commun, 11, 2020
4YU0
DownloadVisualize
BU of 4yu0 by Molmil
Crystal structure of a tetramer of GluA2 TR mutant ligand binding domains bound with glutamate at 1.26 Angstrom resolution
Descriptor: DI(HYDROXYETHYL)ETHER, GLUTAMIC ACID, Glutamate receptor 2,Glutamate receptor 2, ...
Authors:Chebli, M, Salazar, H, Baranovic, J, Carbone, A.L, Ghisi, V, Faelber, K, Lau, A.Y, Daumke, O, Plested, A.J.R.
Deposit date:2015-03-18
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Crystal structure of the tetrameric GluA2 ligand-binding domain in complex with glutamate at 1.26 Angstroms resolution
To Be Published
4FVF
DownloadVisualize
BU of 4fvf by Molmil
SPFH domain of mouse stomatin (Crystal form 1)
Descriptor: ACETATE ION, CADMIUM ION, Stomatin
Authors:Brand, J, Schwefel, D, Daumke, O.
Deposit date:2012-06-29
Release date:2012-08-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.46 Å)
Cite:A stomatin dimer modulates the activity of acid-sensing ion channels.
Embo J., 31, 2012
4Z0I
DownloadVisualize
BU of 4z0i by Molmil
Crystal structure of a tetramer of GluA2 ligand binding domains bound with glutamate at 1.45 Angstrom resolution
Descriptor: DI(HYDROXYETHYL)ETHER, GLUTAMIC ACID, Glutamate receptor 2,Glutamate receptor 2, ...
Authors:Baranovic, J, Chebli, M, Salazar, H, Carbone, A.L, Ghisi, V, Faelber, K, Lau, A.Y, Daumke, O, Plested, A.J.R.
Deposit date:2015-03-26
Release date:2016-01-13
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of the tetrameric wt GluA2 ligand-binding domain bound to glutamate at 1.45 Angstroms resolution
To Be Published
4FVG
DownloadVisualize
BU of 4fvg by Molmil
SPFH domain of mouse stomatin (Crystal form 3)
Descriptor: CADMIUM ION, Stomatin
Authors:Brand, J, Schwefel, D, Daumke, O.
Deposit date:2012-06-29
Release date:2012-08-15
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A stomatin dimer modulates the activity of acid-sensing ion channels.
Embo J., 31, 2012
4ZFO
DownloadVisualize
BU of 4zfo by Molmil
J22.9-xi: chimeric mouse/human antibody against human BCMA (CD269)
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, COPPER (II) ION, J22.9-xi Fab, ...
Authors:Marino, S.F, Daumke, O, Olal, D.
Deposit date:2015-04-21
Release date:2015-05-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.895 Å)
Cite:Potent anti-tumor response by targeting B cell maturation antigen (BCMA) in a mouse model of multiple myeloma.
Mol Oncol, 9, 2015

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon