Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
6O3V
DownloadVisualize
BU of 6o3v by Molmil
Crystal structure for RVA-VP3
Descriptor: 1,2-ETHANEDIOL, GUANOSINE-5'-MONOPHOSPHATE, Protein VP3, ...
Authors:Kumar, D, Yu, X, Wang, Z, Hu, L, Prasad, V.
Deposit date:2019-02-27
Release date:2020-03-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:2.7 angstrom cryo-EM structure of rotavirus core protein VP3, a unique capping machine with a helicase activity.
Sci Adv, 6, 2020
7MRY
DownloadVisualize
BU of 7mry by Molmil
Norovirus T=3 GII.4 HOV VLP
Descriptor: VP1
Authors:Salmen, W, Hu, L, Prasad, B.
Deposit date:2021-05-10
Release date:2022-03-02
Last modified:2024-05-29
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Atomic structure of the predominant GII.4 human norovirus capsid reveals novel stability and plasticity.
Nat Commun, 13, 2022
4P12
DownloadVisualize
BU of 4p12 by Molmil
Native Structure of the P domain from a GI.7 Norovirus variant.
Descriptor: Major capsid protein
Authors:Shanker, S, Czako, R, Sankaran, B, Atmar, R, Estes, M, Prasad, B.V.V.
Deposit date:2014-02-24
Release date:2014-04-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6011 Å)
Cite:Structural analysis of determinants of histo-blood group antigen binding specificity in genogroup I noroviruses.
J.Virol., 88, 2014
4P25
DownloadVisualize
BU of 4p25 by Molmil
Structure of the P domain from a GI.7 Norovirus variant in complex with LeY HBGA.
Descriptor: Major capsid protein, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Shanker, S, Czako, R, Sankaran, B, Atmar, R, Estes, M, Prasad, B.V.V.
Deposit date:2014-03-01
Release date:2014-04-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.4991 Å)
Cite:Structural analysis of determinants of histo-blood group antigen binding specificity in genogroup I noroviruses.
J.Virol., 88, 2014
4P26
DownloadVisualize
BU of 4p26 by Molmil
Structure of the P domain from a GI.7 Norovirus variant in complex with A-type 2 HBGA
Descriptor: P domain of VP1, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Shanker, S, Czako, R, Sankaran, B, Atmar, R, Estes, M, Prasad, B.V.V.
Deposit date:2014-03-01
Release date:2014-04-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural analysis of determinants of histo-blood group antigen binding specificity in genogroup I noroviruses.
J.Virol., 88, 2014
4P2N
DownloadVisualize
BU of 4p2n by Molmil
Structure of the P domain from a GI.7 Norovirus variant in complex with LeX HBGA
Descriptor: Major capsid protein, alpha-L-fucopyranose-(1-3)-[beta-D-galactopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Shanker, S, Czako, R, Sankaran, B, Atmar, R, Estes, M, Prasad, B.V.V.
Deposit date:2014-03-04
Release date:2014-04-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural analysis of determinants of histo-blood group antigen binding specificity in genogroup I noroviruses.
J.Virol., 88, 2014
4P1V
DownloadVisualize
BU of 4p1v by Molmil
Structure of the P domain from a GI.7 Norovirus variant in complex with H-type 2 HBGA
Descriptor: P domain of VPI, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Shanker, S, Czako, R, Sankaran, B, Atmar, R, Estes, M, Prasad, B.V.V.
Deposit date:2014-02-27
Release date:2014-04-02
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5497 Å)
Cite:Structural analysis of determinants of histo-blood group antigen binding specificity in genogroup I noroviruses.
J.Virol., 88, 2014
4P3I
DownloadVisualize
BU of 4p3i by Molmil
Structure of the P domain from a GI.7 Norovirus variant in complex with LeA HBGA.
Descriptor: P domain of VP1, beta-D-galactopyranose-(1-3)-[alpha-L-fucopyranose-(1-4)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Shanker, S, Czako, R, Sankaran, B, Atmar, R, Estes, M, Prasad, B.V.V.
Deposit date:2014-03-07
Release date:2014-04-02
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (1.6941 Å)
Cite:Structural analysis of determinants of histo-blood group antigen binding specificity in genogroup I noroviruses.
J.Virol., 88, 2014
4YG0
DownloadVisualize
BU of 4yg0 by Molmil
Structural basis of glycan recognition in neonate-specific rotaviruses
Descriptor: Outer capsid protein VP4, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Hu, L, Prasad, B.V.V.
Deposit date:2015-02-25
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.285 Å)
Cite:Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun, 6, 2015
4YFW
DownloadVisualize
BU of 4yfw by Molmil
Structural basis of glycan recognition in neonate-specific rotaviruses
Descriptor: Outer capsid protein VP4
Authors:Hu, L, Prasad, B.V.V.
Deposit date:2015-02-25
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun, 6, 2015
4YG6
DownloadVisualize
BU of 4yg6 by Molmil
Structural basis of glycan recognition in neonate-specific rotaviruses
Descriptor: Outer capsid protein VP8*, PHOSPHATE ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Hu, L, Prasad, B.V.V.
Deposit date:2015-02-25
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun, 6, 2015
4YFZ
DownloadVisualize
BU of 4yfz by Molmil
Structural basis of glycan recognition in neonate-specific rotaviruses
Descriptor: Outer capsid protein VP4, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Hu, L, Prasad, B.V.V.
Deposit date:2015-02-25
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun, 6, 2015
4YG3
DownloadVisualize
BU of 4yg3 by Molmil
Structural basis of glycan recognition in neonate-specific rotaviruses
Descriptor: Outer capsid protein VP4, SULFATE ION
Authors:Hu, L, Prasad, B.V.V.
Deposit date:2015-02-25
Release date:2015-09-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.285 Å)
Cite:Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun, 6, 2015
6AUK
DownloadVisualize
BU of 6auk by Molmil
Crystal structure of rotavirus Non Structural protein 2 (NSP2) mutant S313D
Descriptor: CHLORIDE ION, Non-structural protein 2, SULFATE ION
Authors:Hu, L, Prasad, B.V.
Deposit date:2017-09-01
Release date:2018-12-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.603 Å)
Cite:Phosphorylation cascade regulates the formation and maturation of rotaviral replication factories.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CY9
DownloadVisualize
BU of 6cy9 by Molmil
SA11 Rotavirus NSP2 with disulfide bridge
Descriptor: MAGNESIUM ION, Non-structural protein 2
Authors:Anish, R, Hu, L, Sankaran, B, Prasad, B.V.V.
Deposit date:2018-04-05
Release date:2018-12-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.615 Å)
Cite:Phosphorylation cascade regulates the formation and maturation of rotaviral replication factories.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6CYA
DownloadVisualize
BU of 6cya by Molmil
Rotavirus SA11 NSP2 S313A mutant
Descriptor: CHLORIDE ION, GLYCEROL, Non-structural protein 2
Authors:Anish, R, Hu, L, Prasad, B.V.V.
Deposit date:2018-04-05
Release date:2018-12-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Phosphorylation cascade regulates the formation and maturation of rotaviral replication factories.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
4G0A
DownloadVisualize
BU of 4g0a by Molmil
Crystallographic Analysis of Rotavirus NSP2-RNA Complex Reveals Specific Recognition of 5'-GG Sequence for RTPase activity
Descriptor: CHLORIDE ION, Non-structural protein 2, RNA (5'-R(P*GP*GP*U)-3'), ...
Authors:Hu, L, Prasad, B.V.V.
Deposit date:2012-07-09
Release date:2012-08-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.0995 Å)
Cite:Crystallographic Analysis of Rotavirus NSP2-RNA Complex Reveals Specific Recognition of 5' GG Sequence for RTPase Activity.
J.Virol., 86, 2012
4G0J
DownloadVisualize
BU of 4g0j by Molmil
Crystallographic Analysis of Rotavirus NSP2-RNA Complex Reveals Specific Recognition of 5'-GG Sequence for RTPase activity
Descriptor: Non-structural protein 2
Authors:Hu, L, Prasad, B.V.V.
Deposit date:2012-07-09
Release date:2012-08-22
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.398 Å)
Cite:Crystallographic Analysis of Rotavirus NSP2-RNA Complex Reveals Specific Recognition of 5' GG Sequence for RTPase Activity.
J.Virol., 86, 2012
5KW9
DownloadVisualize
BU of 5kw9 by Molmil
Structural Basis for Norovirus Neutralization by a HBGA Blocking Human IgA Antibody
Descriptor: Capsid protein VP1, IgA Light chain, IgA(VH)-IgG(CH) heavy chain Fab fragment, ...
Authors:Shanker, S, Prasad, B.V.V.
Deposit date:2016-07-15
Release date:2016-10-05
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis for norovirus neutralization by an HBGA blocking human IgA antibody.
Proc.Natl.Acad.Sci.USA, 113, 2016
5VX4
DownloadVisualize
BU of 5vx4 by Molmil
VP8* of a G2P[4] Human Rotavirus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer capsid protein VP4
Authors:Hu, L, Venkataram Prasad, B.V.
Deposit date:2017-05-23
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5VX8
DownloadVisualize
BU of 5vx8 by Molmil
VP8* of P[6] Human Rotavirus RV3
Descriptor: Outer capsid protein VP4, SULFATE ION
Authors:Hu, L, Venkataram Prasad, B.V.
Deposit date:2017-05-23
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5VX5
DownloadVisualize
BU of 5vx5 by Molmil
VP8* of a G2P[4] Human Rotavirus in complex with LNFP1
Descriptor: Outer capsid protein VP4, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Hu, L, Venkataram Prasad, B.V.
Deposit date:2017-05-23
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.285 Å)
Cite:Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5VX9
DownloadVisualize
BU of 5vx9 by Molmil
VP8* of P[6] Human Rotavirus RV3 in complex with LNFP1
Descriptor: Outer capsid protein VP4, SULFATE ION, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
Authors:Hu, L, Venkataram Prasad, B.V.
Deposit date:2017-05-23
Release date:2018-07-18
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (1.822 Å)
Cite:Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
<12

 

221051

PDB entries from 2024-06-12

PDB statisticsPDBj update infoContact PDBjnumon