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1N27
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BU of 1n27 by Molmil
Solution structure of the PWWP domain of mouse Hepatoma-derived growth factor, related protein 3
Descriptor: Hepatoma-derived growth factor, related protein 3
Authors:Nameki, N, Kigawa, T, Koshiba, S, Kobayashi, N, Tochio, N, Inoue, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-10-22
Release date:2003-12-23
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the PWWP domain of the hepatoma-derived growth factor family.
Protein Sci., 14, 2005
1AA9
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BU of 1aa9 by Molmil
HUMAN C-HA-RAS(1-171)(DOT)GDP, NMR, MINIMIZED AVERAGE STRUCTURE
Descriptor: C-HA-RAS, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION
Authors:Ito, Y, Yamasaki, Y, Muto, Y, Kawai, G, Nishimura, S, Miyazawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:1997-01-27
Release date:1997-07-29
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Regional polysterism in the GTP-bound form of the human c-Ha-Ras protein.
Biochemistry, 36, 1997
5B6O
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BU of 5b6o by Molmil
Crystal structure of MS8104
Descriptor: 3C-like proteinase
Authors:Wang, H, Kim, Y, Muramatsu, T, Takemoto, C, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2016-05-31
Release date:2016-06-15
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.202 Å)
Cite:SARS-CoV 3CL protease cleaves its C-terminal autoprocessing site by novel subsite cooperativity
Proc. Natl. Acad. Sci. U.S.A., 113, 2016
5GTF
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BU of 5gtf by Molmil
Crystal structure of onion lachrymatory factor synthase (LFS) containing glycerol
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, GLYCEROL, Lachrymatory-factor synthase, ...
Authors:Takabe, J, Arakawa, T, Masamura, N, Tsuge, N, Imai, S, Fushinobu, S.
Deposit date:2016-08-20
Release date:2017-08-23
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Dissecting the Stereocontrolled Conversion of Short-Lived Sulfenic Acid by Lachrymatory Factor Synthase
Acs Catalysis, 10, 2020
5GTE
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BU of 5gte by Molmil
Crystal structure of onion lachrymatory factor synthase (LFS), solute-free form
Descriptor: Lachrymatory-factor synthase, SULFATE ION, alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
Authors:Takabe, J, Arakawa, T, Masamura, N, Tsuge, N, Imai, S, Fushinobu, S.
Deposit date:2016-08-20
Release date:2017-08-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Dissecting the Stereocontrolled Conversion of Short-Lived Sulfenic Acid by Lachrymatory Factor Synthase
Acs Catalysis, 10, 2020
5GTG
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BU of 5gtg by Molmil
Crystal structure of onion lachrymatory factor synthase (LFS) containing 1,2-propanediol
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Lachrymatory-factor synthase, S-1,2-PROPANEDIOL, ...
Authors:Arakawa, T, Sato, Y, Takabe, J, Masamura, N, Tsuge, N, Imai, S, Fushinobu, S.
Deposit date:2016-08-20
Release date:2017-08-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Dissecting the Stereocontrolled Conversion of Short-Lived Sulfenic Acid by Lachrymatory Factor Synthase
Acs Catalysis, 10, 2020
3GKQ
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BU of 3gkq by Molmil
Terminal oxygenase of carbazole 1,9a-dioxygenase from Novosphingobium sp. KA1
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Terminal oxygenase component of carbazole 1,9a-dioxygenase
Authors:Umeda, T, Nojiri, H.
Deposit date:2009-03-11
Release date:2010-03-31
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Specific interaction via putidaredoxin-type ferredoxin in carbazole 1,9a-dioxygenase from Novosphingobium sp. KA1
To be Published
3GCE
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BU of 3gce by Molmil
Ferredoxin of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177
Descriptor: FE2/S2 (INORGANIC) CLUSTER, Ferredoxin component of carbazole 1,9a-dioxygenase
Authors:Inoue, K, Nojiri, H.
Deposit date:2009-02-22
Release date:2009-09-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2 Å)
Cite:Specific Interactions between the ferredoxin and terminal oxygenase components of a class IIB Rieske nonheme iron oxygenase, carbazole 1,9a-dioxygenase.
J.Mol.Biol., 392, 2009
3GCF
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BU of 3gcf by Molmil
Terminal oxygenase of carbazole 1,9a-dioxygenase from Nocardioides aromaticivorans IC177
Descriptor: CHLORIDE ION, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Inoue, K, Nojiri, H.
Deposit date:2009-02-22
Release date:2009-09-15
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Specific Interactions between the ferredoxin and terminal oxygenase components of a class IIB Rieske nonheme iron oxygenase, carbazole 1,9a-dioxygenase.
J.Mol.Biol., 392, 2009
5B2G
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BU of 5b2g by Molmil
Crystal structure of human claudin-4 in complex with C-terminal fragment of Clostridium perfringens enterotoxin
Descriptor: Endolysin,Claudin-4, Heat-labile enterotoxin B chain
Authors:Shinoda, T, Kimura-Someya, T, Shirouzu, M, Yokoyama, S.
Deposit date:2016-01-15
Release date:2016-10-05
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3.5 Å)
Cite:Structural basis for disruption of claudin assembly in tight junctions by an enterotoxin
Sci Rep, 6, 2016
3P0B
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BU of 3p0b by Molmil
Thermus thermophilus family GH57 branching enzyme: crystal structure, mechanism of action and products formed
Descriptor: GLYCEROL, TT1467 protein
Authors:Pijning, T, Dijkstra, B.W.
Deposit date:2010-09-28
Release date:2010-10-20
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Thermus thermophilus GLYCOSYL HYDROLASE FAMILY 57 branching enzyme: crystal structure, mechanism of action and products formed
To be Published
6IES
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BU of 6ies by Molmil
Onion lachrymatory factor synthase (LFS) containing (E)-2-propen 1-ol (crotyl alcohol)
Descriptor: (2E)-but-2-en-1-ol, Lachrymatory-factor synthase
Authors:Sato, Y, Arakawa, T, Takabe, J, Masamura, N, Tsuge, N, Imai, S, Fushinobu, S.
Deposit date:2018-09-17
Release date:2019-09-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Dissecting the Stereocontrolled Conversion of Short-Lived Sulfenic Acid by Lachrymatory Factor Synthase.
Acs Catalysis, 10, 2020
6IMU
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BU of 6imu by Molmil
The apo-structure of endo-beta-1,2-glucanase from Talaromyces funiculosus
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CITRIC ACID, DI(HYDROXYETHYL)ETHER, ...
Authors:Tanaka, N, Nakajima, M, Narukawa-Nara, M, Matsunaga, H, Kamisuki, S, Aramasa, H, Takahashi, Y, Sugimoto, N, Abe, K, Miyanaga, A, Yamashita, T, Sugawara, F, Kamakura, T, Komba, S, Nakai, H, Taguchi, H.
Deposit date:2018-10-23
Release date:2019-04-10
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification, characterization, and structural analyses of a fungal endo-beta-1,2-glucanase reveal a new glycoside hydrolase family.
J.Biol.Chem., 294, 2019
6IMW
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BU of 6imw by Molmil
The complex structure of endo-beta-1,2-glucanase mutant (E262Q) from Talaromyces funiculosus with beta-1,2-glucan
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, Endo-beta-1,2-glucanase, ...
Authors:Tanaka, N, Nakajima, M, Narukawa-Nara, M, Matsunaga, H, Kamisuki, S, Aramasa, H, Takahashi, Y, Sugimoto, N, Abe, K, Miyanaga, A, Yamashita, T, Sugawara, F, Kamakura, T, Komba, S, Nakai, H, Taguchi, H.
Deposit date:2018-10-23
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Identification, characterization, and structural analyses of a fungal endo-beta-1,2-glucanase reveal a new glycoside hydrolase family.
J.Biol.Chem., 294, 2019
6IMV
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BU of 6imv by Molmil
The complex structure of endo-beta-1,2-glucanase from Talaromyces funiculosus with sophorose
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, DI(HYDROXYETHYL)ETHER, ...
Authors:Tanaka, N, Nakajima, M, Narukawa-Nara, M, Matsunaga, H, Kamisuki, S, Aramasa, H, Takahashi, Y, Sugimoto, N, Abe, K, Miyanaga, A, Yamashita, T, Sugawara, F, Kamakura, T, Komba, S, Nakai, H, Taguchi, H.
Deposit date:2018-10-23
Release date:2019-04-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Identification, characterization, and structural analyses of a fungal endo-beta-1,2-glucanase reveal a new glycoside hydrolase family.
J.Biol.Chem., 294, 2019
4YD9
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BU of 4yd9 by Molmil
Crystal structure of squid hemocyanin
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CU2-O2 CLUSTER, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Matsuno, A, Gai, Z, Kato, K, Tanaka, Y, Yao, M.
Deposit date:2015-02-21
Release date:2015-10-14
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of the 3.8-MDa Respiratory Supermolecule Hemocyanin at 3.0 angstrom Resolution
Structure, 23, 2015
4NB9
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BU of 4nb9 by Molmil
Oxygenase with Ile262 replaced by Val and ferredoxin complex of carbazole 1,9a-dioxygenase
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin CarAc, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
4NBB
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BU of 4nbb by Molmil
Carbazole- and oxygen-bound oxygenase with Ile262 replaced by Val and ferredoxin complex of carbazole 1,9a-dioxygenase
Descriptor: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
4NBC
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BU of 4nbc by Molmil
Oxygenase with Phe275 replaced by Trp and ferredoxin complex of carbazole 1,9a-dioxygenase (form1)
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin CarAc, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.945 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
4NBE
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BU of 4nbe by Molmil
Fluorene-bound oxygenase with Phe275 replaced by Trp and ferredoxin complex of carbazole 1,9a-dioxygenase (form2)
Descriptor: 9H-fluorene, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
4NB8
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BU of 4nb8 by Molmil
Oxygenase with Ile262 replaced by Leu and ferredoxin complex of carbazole 1,9a-dioxygenase
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin CarAc, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
4NBH
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BU of 4nbh by Molmil
Carbazole-bound Oxygenase with Gln282 replaced by Tyr and ferredoxin complex of carbazole 1,9a-dioxygenase
Descriptor: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
4NBA
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BU of 4nba by Molmil
Carbazole-bound oxygenase with Ile262 replaced by Val and ferredoxin complex of carbazole 1,9a-dioxygenase
Descriptor: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
4NBF
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BU of 4nbf by Molmil
Oxygenase with Gln282 replaced by Asn and ferredoxin complex of carbazole 1,9a-dioxygenase
Descriptor: FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, Ferredoxin CarAc, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014
4NBD
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BU of 4nbd by Molmil
Carbazole-bound oxygenase with Phe275 replaced by Trp and ferredoxin complex of carbazole 1,9a-dioxygenase (form2)
Descriptor: 9H-CARBAZOLE, FE (II) ION, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Ashikawa, Y, Usami, Y, Inoue, K, Nojiri, H.
Deposit date:2013-10-23
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural basis of the divergent oxygenation reactions catalyzed by the rieske nonheme iron oxygenase carbazole 1,9a-dioxygenase.
Appl.Environ.Microbiol., 80, 2014

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