7DE8
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2Z23
| Crystal structure of Y.pestis oligo peptide binding protein OppA with tri-lysine ligand | Descriptor: | Periplasmic oligopeptide-binding protein, peptide (LYS)(LYS)(LYS) | Authors: | Tanabe, M, Bertland, T, Mirza, O, Byrne, B, Brown, K.A. | Deposit date: | 2007-05-17 | Release date: | 2007-10-30 | Last modified: | 2011-07-13 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structures of OppA and PstS from Yersinia pestis indicate variability of interactions with transmembrane domains. Acta Crystallogr.,Sect.D, 63, 2007
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2Z22
| Crystal structure of phosphate preplasmic binding protein psts from yersinia pestis | Descriptor: | PHOSPHATE ION, Periplasmic phosphate-binding protein | Authors: | Tanabe, M, Byrne, B, Brown, K.A, Mirza, O, Bertland, T. | Deposit date: | 2007-05-17 | Release date: | 2007-10-30 | Last modified: | 2024-03-13 | Method: | X-RAY DIFFRACTION (2 Å) | Cite: | Structures of OppA and PstS from Yersinia pestis indicate variability of interactions with transmembrane domains. Acta Crystallogr.,Sect.D, 63, 2007
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3A2S
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3VZT
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3VZW
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3VZU
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6GV1
| Crystal structure of E.coli Multidrug/H+ antiporter MdfA in outward open conformation with bound Fab fragment | Descriptor: | Fab fragment YN1074 heavy chain, Fab fragment YN1074 light chain, Major Facilitator Superfamily multidrug/H+ antiporter MdfA from E.coli, ... | Authors: | Nagarathinam, K, Parthier, C, Stubbs, M.T, Tanabe, M. | Deposit date: | 2018-06-20 | Release date: | 2018-10-03 | Last modified: | 2024-01-17 | Method: | X-RAY DIFFRACTION (3.4 Å) | Cite: | Outward open conformation of a Major Facilitator Superfamily multidrug/H+antiporter provides insights into switching mechanism. Nat Commun, 9, 2018
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5AX2
| Crystal structure of S.cerevisiae Kti11p | Descriptor: | CADMIUM ION, Diphthamide biosynthesis protein 3 | Authors: | Kumar, A, Nagarathinam, K, Tanabe, M, Balbach, J. | Deposit date: | 2015-07-13 | Release date: | 2016-07-20 | Last modified: | 2019-02-20 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Hyperbolic Pressure-Temperature Phase Diagram of the Zinc-Finger Protein apoKti11 Detected by NMR Spectroscopy. J Phys Chem B, 123, 2019
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8IIA
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4H0O
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7COQ
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6KFQ
| Crystal structure of thermophilic rhodopsin from Rubrobacter xylanophilus | Descriptor: | RETINAL, Rhodopsin, SULFATE ION, ... | Authors: | Suzuki, K, Akiyama, T, Hayashi, T, Yasuda, S, Kanehara, K, Kojima, K, Tanabe, M, Kato, R, Senda, T, Sudo, Y, Kinoshita, M, Murata, T. | Deposit date: | 2019-07-08 | Release date: | 2020-04-08 | Last modified: | 2023-11-22 | Method: | X-RAY DIFFRACTION (1.84 Å) | Cite: | How Does a Microbial Rhodopsin RxR Realize Its Exceptionally High Thermostability with the Proton-Pumping Function Being Retained? J.Phys.Chem.B, 124, 2020
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8IGW
| Hexameric Ring Complex of Engineered V1-ATPase bound to 4 ADPs: A3(De)3_(ADP)3cat,1non-cat, Hexameric Ring Complex of Engineered V1-ATPase bound to 5 ADPs: A3(De)3_(ADP)3cat,2non-cat | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, V-type sodium ATPase catalytic subunit A, ... | Authors: | Kosugi, T, Tanabe, M, Koga, N. | Deposit date: | 2023-02-21 | Release date: | 2023-07-12 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (4.2 Å) | Cite: | Design of allosteric sites into rotary motor V 1 -ATPase by restoring lost function of pseudo-active sites. Nat.Chem., 15, 2023
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8IGV
| Hexameric Ring Complex of Engineered V1-ATPase bound to 5 ADPs: A3(De)3_(ADP-Pi)1cat(ADP)2cat,2non-cat | Descriptor: | ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ... | Authors: | Kosugi, T, Tanabe, M, Koga, N. | Deposit date: | 2023-02-21 | Release date: | 2023-07-12 | Last modified: | 2023-11-15 | Method: | X-RAY DIFFRACTION (3.15 Å) | Cite: | Design of allosteric sites into rotary motor V 1 -ATPase by restoring lost function of pseudo-active sites. Nat.Chem., 15, 2023
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8IGU
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3VY9
| Crystal structure of PorB from Neisseria meningitidis in complex with cesium ion, space group H32 | Descriptor: | CESIUM ION, Outer membrane protein | Authors: | Kattner, C, Zaucha, J, Jaenecke, F, Zachariae, U, Tanabe, M. | Deposit date: | 2012-09-21 | Release date: | 2013-01-02 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.63 Å) | Cite: | Identification of a cation transport pathway in Neisseria meningitidis PorB. Proteins, 81, 2013
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3VY8
| Crystal Structure of PorB from Neisseria meningitidis in complex with Cesium ion, space group P63 | Descriptor: | CESIUM ION, Outer membrane protein | Authors: | Kattner, C, Zaucha, J, Jaenecke, F, Zachariae, U, Tanabe, M. | Deposit date: | 2012-09-21 | Release date: | 2013-01-02 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.12 Å) | Cite: | Identification of a cation transport pathway in Neisseria meningitidis PorB. Proteins, 81, 2013
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3WI5
| Crystal structure of the Loop 7 mutant PorB from Neisseria meningitidis serogroup B | Descriptor: | CITRATE ANION, Major outer membrane protein P.IB | Authors: | Kattner, C, Toussi, D, Wetzler, L.M, Ruppel, N, Massari, P, Tanabe, M. | Deposit date: | 2013-09-05 | Release date: | 2014-01-01 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.4 Å) | Cite: | Crystallographic analysis of Neisseria meningitidis PorB extracellular loops potentially implicated in TLR2 recognition. J.Struct.Biol., 185, 2014
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3WI4
| Crystal structure of wild-type PorB from Neisseria meningitidis serogroup B | Descriptor: | Major outer membrane protein P.IB | Authors: | Kattner, C, Toussi, D, Wetzler, L.M, Ruppel, N, Massari, P, Tanabe, M. | Deposit date: | 2013-09-05 | Release date: | 2014-01-01 | Last modified: | 2024-03-20 | Method: | X-RAY DIFFRACTION (3.32 Å) | Cite: | Crystallographic analysis of Neisseria meningitidis PorB extracellular loops potentially implicated in TLR2 recognition. J.Struct.Biol., 185, 2014
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