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6J6Y
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BU of 6j6y by Molmil
FGFR4 D2 - Fab complex
Descriptor: Fab Heavy chain, Fab light chain, Fibroblast growth factor receptor 4
Authors:Takahashi, M, Hanzawa, H.
Deposit date:2019-01-16
Release date:2019-08-07
Last modified:2019-10-16
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Preclinical Development of U3-1784, a Novel FGFR4 Antibody Against Cancer, and Avoidance of Its On-target Toxicity.
Mol.Cancer Ther., 18, 2019
4PSB
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BU of 4psb by Molmil
Crystal Structure of Phytohormone Binding Protein from Vigna radiata in complex with gibberellic acid (GA3)
Descriptor: Cytokinin-specific binding protein, GIBBERELLIN A3
Authors:Ruszkowski, M, Sikorski, M, Jaskolski, M.
Deposit date:2014-03-07
Release date:2014-07-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Specific binding of gibberellic acid by Cytokinin-Specific Binding Proteins: a new aspect of plant hormone-binding proteins with the PR-10 fold.
Acta Crystallogr.,Sect.D, 70, 2014
4Q0K
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BU of 4q0k by Molmil
Crystal Structure of Phytohormone Binding Protein from Medicago truncatula in complex with gibberellic acid (GA3)
Descriptor: GIBBERELLIN A3, GLYCEROL, PHYTOHORMONE BINDING PROTEIN MTPHBP
Authors:Ciesielska, A, Barciszewski, J, Ruszkowski, M, Jaskolski, M, Sikorski, M.
Deposit date:2014-04-02
Release date:2014-04-23
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Specific binding of gibberellic acid by Cytokinin-Specific Binding Proteins: a new aspect of plant hormone-binding proteins with the PR-10 fold.
Acta Crystallogr.,Sect.D, 70, 2014
4Y4S
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BU of 4y4s by Molmil
Crystal Structure of Y75A HasA dimer from Yersinia pseudotuberculosis
Descriptor: Extracellular heme acquisition hemophore HasA, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
Authors:Hino, T, Kanadani, M, Muroki, T, Ishimaru, Y, Wada, Y, Sato, T, Ozaki, S.
Deposit date:2015-02-11
Release date:2015-08-12
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The crystal structure of heme acquisition system A from Yersinia pseudotuberculosis (HasAypt): Roles of the axial ligand Tyr75 and two distal arginines in heme binding
J.Inorg.Biochem., 151, 2015
6LM0
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BU of 6lm0 by Molmil
The crystal structure of cyanorhodopsin (CyR) N2098R from cyanobacteria Calothrix sp. NIES-2098
Descriptor: DECANE, HEXANE, N-OCTANE, ...
Authors:Hosaka, T, Kimura-Someya, T, Shirouzu, M.
Deposit date:2019-12-24
Release date:2020-10-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:A unique clade of light-driven proton-pumping rhodopsins evolved in the cyanobacterial lineage.
Sci Rep, 10, 2020
6LM1
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BU of 6lm1 by Molmil
The crystal structure of cyanorhodopsin (CyR) N4075R from cyanobacteria Tolypothrix sp. NIES-4075
Descriptor: DECANE, DODECANE, HEXADECANE, ...
Authors:Hosaka, T, Kimura-Someya, T, Shirouzu, M.
Deposit date:2019-12-24
Release date:2020-10-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A unique clade of light-driven proton-pumping rhodopsins evolved in the cyanobacterial lineage.
Sci Rep, 10, 2020
8W42
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BU of 8w42 by Molmil
X-ray crystal structure of V30M-TTR in complex with resveratrol
Descriptor: RESVERATROL, SODIUM ION, Transthyretin
Authors:Yokoyama, T.
Deposit date:2023-08-23
Release date:2023-11-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Resveratrol Derivatives Inhibit Transthyretin Fibrillization: Structural Insights into the Interactions between Resveratrol Derivatives and Transthyretin.
J.Med.Chem., 66, 2023
8W44
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BU of 8w44 by Molmil
X-ray crystal structure of V30M-TTR in complex with oxyresveratrol
Descriptor: SODIUM ION, Transthyretin, trans-oxyresveratrol
Authors:Yokoyama, T.
Deposit date:2023-08-23
Release date:2023-11-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.399 Å)
Cite:Resveratrol Derivatives Inhibit Transthyretin Fibrillization: Structural Insights into the Interactions between Resveratrol Derivatives and Transthyretin.
J.Med.Chem., 66, 2023
8W46
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BU of 8w46 by Molmil
X-ray crystal structure of V30M-TTR in complex with pterostilbene
Descriptor: Pterostilbene, SODIUM ION, Transthyretin
Authors:Yokoyama, T.
Deposit date:2023-08-23
Release date:2023-11-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Resveratrol Derivatives Inhibit Transthyretin Fibrillization: Structural Insights into the Interactions between Resveratrol Derivatives and Transthyretin.
J.Med.Chem., 66, 2023
8W48
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BU of 8w48 by Molmil
Neutron and X-ray joint structure of WT-TTR in complex with piceatannol
Descriptor: PICEATANNOL, Transthyretin
Authors:Yokoyama, T, Kusaka, K, Fujiwara, S.
Deposit date:2023-08-23
Release date:2023-11-22
Last modified:2023-12-06
Method:NEUTRON DIFFRACTION (1.19 Å), X-RAY DIFFRACTION
Cite:Resveratrol Derivatives Inhibit Transthyretin Fibrillization: Structural Insights into the Interactions between Resveratrol Derivatives and Transthyretin.
J.Med.Chem., 66, 2023
8W43
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BU of 8w43 by Molmil
X-ray crystal structure of V30M-TTR in complex with piceatannol
Descriptor: PICEATANNOL, SODIUM ION, Transthyretin
Authors:Yokoyama, T.
Deposit date:2023-08-23
Release date:2023-11-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.302 Å)
Cite:Resveratrol Derivatives Inhibit Transthyretin Fibrillization: Structural Insights into the Interactions between Resveratrol Derivatives and Transthyretin.
J.Med.Chem., 66, 2023
8W45
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BU of 8w45 by Molmil
X-ray crystal structure of V30M-TTR in complex with pinostilbene
Descriptor: 3-[(E)-2-(4-hydroxyphenyl)ethenyl]-5-methoxy-phenol, SODIUM ION, Transthyretin
Authors:Yokoyama, T.
Deposit date:2023-08-23
Release date:2023-11-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Resveratrol Derivatives Inhibit Transthyretin Fibrillization: Structural Insights into the Interactions between Resveratrol Derivatives and Transthyretin.
J.Med.Chem., 66, 2023
8W47
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BU of 8w47 by Molmil
X-ray crystal structure of V30M-TTR in complex with isorhapontigenin
Descriptor: 5-[(~{E})-2-(3-methoxy-4-oxidanyl-phenyl)ethenyl]benzene-1,3-diol, SODIUM ION, Transthyretin
Authors:Yokoyama, T.
Deposit date:2023-08-23
Release date:2023-11-22
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Resveratrol Derivatives Inhibit Transthyretin Fibrillization: Structural Insights into the Interactions between Resveratrol Derivatives and Transthyretin.
J.Med.Chem., 66, 2023
8WGS
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BU of 8wgs by Molmil
Crystal structure of V30M-TTR in complex with compound 4
Descriptor: Transthyretin, [3,5-bis(iodanyl)-4-oxidanyl-phenyl]-(2-ethyl-4-iodanyl-1-benzofuran-3-yl)methanone
Authors:Yokoyama, T.
Deposit date:2023-09-22
Release date:2024-05-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.801 Å)
Cite:Development of Benziodarone Analogues with Enhanced Potency for Selective Binding to Transthyretin in Human Plasma.
J.Med.Chem., 67, 2024
8WGU
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BU of 8wgu by Molmil
Crystal structure of V30M-TTR in complex with compound 20
Descriptor: Transthyretin, [3,5-bis(iodanyl)-4-oxidanyl-phenyl]-[2-ethyl-4,7-bis(fluoranyl)-1-benzofuran-3-yl]methanone
Authors:Yokoyama, T.
Deposit date:2023-09-22
Release date:2024-05-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.508 Å)
Cite:Development of Benziodarone Analogues with Enhanced Potency for Selective Binding to Transthyretin in Human Plasma.
J.Med.Chem., 67, 2024
8WGT
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BU of 8wgt by Molmil
Crystal structure of V30M-TTR in complex with compound 7
Descriptor: Transthyretin, [4,7-bis(chloranyl)-2-ethyl-1-benzofuran-3-yl]-[3,5-bis(iodanyl)-4-oxidanyl-phenyl]methanone
Authors:Yokoyama, T.
Deposit date:2023-09-22
Release date:2024-05-15
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.696 Å)
Cite:Development of Benziodarone Analogues with Enhanced Potency for Selective Binding to Transthyretin in Human Plasma.
J.Med.Chem., 67, 2024
4GY9
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BU of 4gy9 by Molmil
Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with N6-isopentenyladenine (2iP)
Descriptor: MALONATE ION, MtN13 protein, N-(3-METHYLBUT-2-EN-1-YL)-9H-PURIN-6-AMINE, ...
Authors:Ruszkowski, M, Sikorski, M, Jaskolski, M.
Deposit date:2012-09-05
Release date:2013-09-04
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:The landscape of cytokinin binding by a plant nodulin.
Acta Crystallogr.,Sect.D, 69, 2013
4JHI
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BU of 4jhi by Molmil
Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with N6-benzyladenine
Descriptor: MtN13 protein, N-BENZYL-9H-PURIN-6-AMINE, SODIUM ION
Authors:Ruszkowski, M, Sikorski, M, Jaskolski, M.
Deposit date:2013-03-05
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:The landscape of cytokinin binding by a plant nodulin.
Acta Crystallogr.,Sect.D, 69, 2013
4JHG
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BU of 4jhg by Molmil
Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with trans-zeatin
Descriptor: (2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol, MALONATE ION, MtN13 protein, ...
Authors:Ruszkowski, M, Tusnio, K, Ciesielska, A, Brzezinski, K, Dauter, M, Dauter, Z, Sikorski, M, Jaskolski, M.
Deposit date:2013-03-05
Release date:2013-03-20
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:The landscape of cytokinin binding by a plant nodulin.
Acta Crystallogr.,Sect.D, 69, 2013
2L6M
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BU of 2l6m by Molmil
Structure of C-terminal dsRBD of the Fission Yeast DICER (Dcr1)
Descriptor: Protein Dicer, ZINC ION
Authors:Barraud, P, Allain, F.H.-T.
Deposit date:2010-11-23
Release date:2011-08-24
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:An extended dsRBD with a novel zinc-binding motif mediates nuclear retention of fission yeast Dicer.
Embo J., 30, 2011
4JHH
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BU of 4jhh by Molmil
Crystal Structure of Medicago truncatula Nodulin 13 (MtN13) in complex with kinetin
Descriptor: MALONATE ION, MtN13 protein, N-(FURAN-2-YLMETHYL)-7H-PURIN-6-AMINE, ...
Authors:Ruszkowski, M, Sikorski, M, Jaskolski, M.
Deposit date:2013-03-05
Release date:2013-12-04
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The landscape of cytokinin binding by a plant nodulin.
Acta Crystallogr.,Sect.D, 69, 2013
2QIM
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BU of 2qim by Molmil
Crystal Structure of Pathogenesis-related Protein LlPR-10.2B from yellow lupine in complex with Cytokinin
Descriptor: (2E)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol, CALCIUM ION, GLYCEROL, ...
Authors:Fernandes, H.C, Pasternak, O, Bujacz, G, Bujacz, A, Sikorski, M.M, Jaskolski, M.
Deposit date:2007-07-05
Release date:2008-04-29
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Lupinus luteus pathogenesis-related protein as a reservoir for cytokinin.
J.Mol.Biol., 378, 2008
8Z56
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BU of 8z56 by Molmil
Crystal structure of human Q140L-SIRT5 in complex with succinylated Prx1 fragment
Descriptor: CHLORIDE ION, GLYCEROL, NAD-dependent protein deacylase sirtuin-5, ...
Authors:Yokoyama, T, Takayama, Y.
Deposit date:2024-04-18
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.806 Å)
Cite:SIRT5 mutants reveal the role of conserved asparagine and glutamine residues in the NAD + -binding pocket.
Febs Lett., 598, 2024
8Z55
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BU of 8z55 by Molmil
Crystal structure of human SIRT5 in complex with succPrx1 and ADP ribose
Descriptor: ADENOSINE-5'-DIPHOSPHATE, NAD-dependent protein deacylase sirtuin-5, mitochondrial, ...
Authors:Yokoyama, T, Takayama, Y.
Deposit date:2024-04-18
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:SIRT5 mutants reveal the role of conserved asparagine and glutamine residues in the NAD + -binding pocket.
Febs Lett., 598, 2024
8Z54
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BU of 8z54 by Molmil
Crystal structure of human SIRT5 in complex with succinylated Prx1 fragment
Descriptor: DIMETHYL SULFOXIDE, NAD-dependent protein deacylase sirtuin-5, mitochondrial, ...
Authors:Yokoyama, T, Takayama, Y.
Deposit date:2024-04-18
Release date:2024-10-09
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:SIRT5 mutants reveal the role of conserved asparagine and glutamine residues in the NAD + -binding pocket.
Febs Lett., 598, 2024

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PDB entries from 2024-10-16

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