Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help
Search by PDB author
8OKH
DownloadVisualize
BU of 8okh by Molmil
Crystal structure of Bdellovibrio bacteriovorus Bd1399
Descriptor: 1,2-ETHANEDIOL, DUF2807 domain-containing protein, GLYCEROL
Authors:Caulton, S.G, Lovering, A.L.
Deposit date:2023-03-28
Release date:2023-10-25
Last modified:2024-11-20
Method:X-RAY DIFFRACTION (2.17 Å)
Cite:Protein target highlights in CASP15: Analysis of models by structure providers.
Proteins, 91, 2023
8KFD
DownloadVisualize
BU of 8kfd by Molmil
Ferritin drug carrier(FDC) for encapsulated platinum (IV) prodrug for esophageal squamous cell carcinoma targeted therapy
Descriptor: CALCIUM ION, CHLORIDE ION, Ferritin heavy chain, ...
Authors:Chen, X.
Deposit date:2023-08-15
Release date:2024-05-29
Last modified:2024-12-18
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure-Guided Design of Ferritin-Platinum Prodrugs for Targeted Therapy of Esophageal Squamous Cell Carcinoma.
Acs Nano, 18, 2024
7E3J
DownloadVisualize
BU of 7e3j by Molmil
Crystal structure of SARS-CoV-2 RBD binding to dog ACE2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ACE2, Spike protein S1, ...
Authors:Zhang, Z, Zhang, Y.
Deposit date:2021-02-08
Release date:2021-04-07
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:The molecular basis for SARS-CoV-2 binding to dog ACE2.
Nat Commun, 12, 2021
8X6Q
DownloadVisualize
BU of 8x6q by Molmil
Crystal structure of OsHSL1 L204F/F298L/I335F complexed with 2-acetyl-cyclohexane-2,4-dione
Descriptor: 2-OXOGLUTARIC ACID, 2-ethanoyl-3-oxidanyl-cyclohex-2-en-1-one, COBALT (II) ION, ...
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2023-11-21
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.39 Å)
Cite:An artificially evolved gene for herbicide-resistant rice breeding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8X7D
DownloadVisualize
BU of 8x7d by Molmil
Crystal structure of OsHSL1 L204F/F298L/I335F
Descriptor: 2-OXOGLUTARIC ACID, COBALT (II) ION, HPPD Inhibitor Sensitive 1-like 1 protein
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2023-11-23
Release date:2024-10-02
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:An artificially evolved gene for herbicide-resistant rice breeding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8X74
DownloadVisualize
BU of 8x74 by Molmil
Crystal structure of ZmHSL1A complexed with mesotrione
Descriptor: 2-OXOGLUTARIC ACID, 2-[(4-methylsulfonyl-2-nitro-phenyl)-oxidanyl-methylidene]cyclohexane-1,3-dione, 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, ...
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2023-11-22
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.791 Å)
Cite:An artificially evolved gene for herbicide-resistant rice breeding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8XC3
DownloadVisualize
BU of 8xc3 by Molmil
Crystal structure of ZmHSL1A-MBQ complex
Descriptor: 1,5-dimethyl-3-(2-methylphenyl)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 2-OXOGLUTARIC ACID, 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, ...
Authors:Yang, G.-F, Lin, H.-Y, Dong, J.
Deposit date:2023-12-07
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.79 Å)
Cite:An artificially evolved gene for herbicide-resistant rice breeding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8X7C
DownloadVisualize
BU of 8x7c by Molmil
Crystal structure of ZmHSL1A
Descriptor: 2-OXOGLUTARIC ACID, 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein, COBALT (II) ION
Authors:Lin, H.-Y, Dong, J, Yang, G.-F.
Deposit date:2023-11-23
Release date:2024-10-02
Method:X-RAY DIFFRACTION (1.597 Å)
Cite:An artificially evolved gene for herbicide-resistant rice breeding.
Proc.Natl.Acad.Sci.USA, 121, 2024
8YNZ
DownloadVisualize
BU of 8ynz by Molmil
The structure of EfpA_BRD-8000.3 complex
Descriptor: (1S,3S)-N-[6-bromo-5-(pyrimidin-2-yl)pyridin-2-yl]-2,2-dimethyl-3-(2-methylprop-1-en-1-yl)cyclopropane-1-carboxamide, Uncharacterized MFS-type transporter EfpA
Authors:Li, D.L, Sun, J.Q.
Deposit date:2024-03-12
Release date:2024-12-04
Method:ELECTRON MICROSCOPY (3.41 Å)
Cite:Structure and function of Mycobacterium tuberculosis EfpA as a lipid transporter and its inhibition by BRD-8000.3.
Proc.Natl.Acad.Sci.USA, 121, 2024
8WSP
DownloadVisualize
BU of 8wsp by Molmil
Crystal structure of SFTSV Gn and antibody SF5
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ab5-H, Ab5-L, ...
Authors:Chang, Z, Gao, F, Wu, Y.
Deposit date:2023-10-17
Release date:2024-06-12
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Bispecific antibodies targeting two glycoproteins on SFTSV exhibit synergistic neutralization and protection in a mouse model.
Proc.Natl.Acad.Sci.USA, 121, 2024
8WQW
DownloadVisualize
BU of 8wqw by Molmil
Cryo-EM structure of bsAb3 Fab-Gn-Gc complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Glycoprotein C, Glycoprotein N, ...
Authors:Wu, Y, Sun, J.Q.
Deposit date:2023-10-12
Release date:2024-06-12
Last modified:2025-07-02
Method:ELECTRON MICROSCOPY (3.27 Å)
Cite:Bispecific antibodies targeting two glycoproteins on SFTSV exhibit synergistic neutralization and protection in a mouse model.
Proc.Natl.Acad.Sci.USA, 121, 2024
8WSU
DownloadVisualize
BU of 8wsu by Molmil
Crystal structure of SFTSV Gc and antibody
Descriptor: Ab-H, Ab-L, Glycoprotein C
Authors:Chang, Z, Gao, F, Wu, Y.
Deposit date:2023-10-17
Release date:2024-06-12
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Bispecific antibodies targeting two glycoproteins on SFTSV exhibit synergistic neutralization and protection in a mouse model.
Proc.Natl.Acad.Sci.USA, 121, 2024
8WSN
DownloadVisualize
BU of 8wsn by Molmil
Crystal structure of SFTSV Gn and antibody SF1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Ab1-H, ...
Authors:Chang, Z, Gao, F, Wu, Y.
Deposit date:2023-10-17
Release date:2024-06-12
Last modified:2024-11-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Bispecific antibodies targeting two glycoproteins on SFTSV exhibit synergistic neutralization and protection in a mouse model.
Proc.Natl.Acad.Sci.USA, 121, 2024
7EY9
DownloadVisualize
BU of 7ey9 by Molmil
tail proteins
Descriptor: Tail fiber protein, Tail tubular protein gp11, Tail tubular protein gp12
Authors:Liu, H.R, Chen, W.Y.
Deposit date:2021-05-30
Release date:2021-09-22
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural changes in bacteriophage T7 upon receptor-induced genome ejection.
Proc.Natl.Acad.Sci.USA, 118, 2021
7EY6
DownloadVisualize
BU of 7ey6 by Molmil
The portal protein (GP8) of bacteriophage T7
Descriptor: Portal protein
Authors:Liu, H.R, Chen, W.Y.
Deposit date:2021-05-30
Release date:2021-09-22
Last modified:2025-06-18
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural changes in bacteriophage T7 upon receptor-induced genome ejection.
Proc.Natl.Acad.Sci.USA, 118, 2021
7EYB
DownloadVisualize
BU of 7eyb by Molmil
core proteins
Descriptor: Internal virion protein gp14, Internal virion protein gp15, Peptidoglycan transglycosylase gp16
Authors:Liu, H.R, Chen, W.Y.
Deposit date:2021-05-30
Release date:2021-09-22
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (3.7 Å)
Cite:Structural changes in bacteriophage T7 upon receptor-induced genome ejection.
Proc.Natl.Acad.Sci.USA, 118, 2021
7EY8
DownloadVisualize
BU of 7ey8 by Molmil
portal
Descriptor: Portal protein
Authors:Liu, H.R, Chen, W.Y.
Deposit date:2021-05-30
Release date:2021-09-22
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural changes in bacteriophage T7 upon receptor-induced genome ejection.
Proc.Natl.Acad.Sci.USA, 118, 2021
7EY7
DownloadVisualize
BU of 7ey7 by Molmil
bacteriophage T7 tail complex
Descriptor: Internal virion protein gp14, Tail fiber protein, Tail tubular protein gp11, ...
Authors:Liu, H.R, Chen, W.Y.
Deposit date:2021-05-30
Release date:2021-09-22
Last modified:2025-06-25
Method:ELECTRON MICROSCOPY (4.3 Å)
Cite:Structural changes in bacteriophage T7 upon receptor-induced genome ejection.
Proc.Natl.Acad.Sci.USA, 118, 2021
7BZ5
DownloadVisualize
BU of 7bz5 by Molmil
Structure of COVID-19 virus spike receptor-binding domain complexed with a neutralizing antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of B38, Light chain of B38, ...
Authors:Wu, Y, Qi, J, Gao, F.
Deposit date:2020-04-26
Release date:2020-05-13
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:A noncompeting pair of human neutralizing antibodies block COVID-19 virus binding to its receptor ACE2.
Science, 368, 2020
7CRE
DownloadVisualize
BU of 7cre by Molmil
hnRNPK KH3 domain in complex with a ssDNA fragment from the SIRLOIN element
Descriptor: Heterogeneous nuclear ribonucleoprotein K, SODIUM ION, ssDNA fragment
Authors:Yao, J, Sun, Q.
Deposit date:2020-08-13
Release date:2021-12-15
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3 Å)
Cite:Nuclear import receptors and hnRNPK mediates nuclear import and stress granule localization of SIRLOIN.
Cell.Mol.Life Sci., 78, 2021
7CRU
DownloadVisualize
BU of 7cru by Molmil
hnRNPK NLS in complex with Importin alpha 1 (KPNA2)
Descriptor: ACETATE ION, GLYCEROL, Heterogeneous nuclear ribonucleoprotein K, ...
Authors:Yao, J, Sun, Q.
Deposit date:2020-08-14
Release date:2021-11-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Nuclear import receptors and hnRNPK mediates nuclear import and stress granule localization of SIRLOIN.
Cell.Mol.Life Sci., 78, 2021
7E0X
DownloadVisualize
BU of 7e0x by Molmil
Crystal structure of Arabidopsis thaliana HPPD complexed with 4-hydroxyphenylacetic acid
Descriptor: 4-HYDROXYPHENYLACETATE, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
Authors:Lin, H.Y, Yang, G.F.
Deposit date:2021-01-28
Release date:2021-12-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.887 Å)
Cite:Rational Redesign of Enzyme via the Combination of Quantum Mechanics/Molecular Mechanics, Molecular Dynamics, and Structural Biology Study.
J.Am.Chem.Soc., 143, 2021
7EW9
DownloadVisualize
BU of 7ew9 by Molmil
GDP-bound KRAS G12D in complex with TH-Z816
Descriptor: 7-(8-methylnaphthalen-1-yl)-4-[(2~{R})-2-methylpiperazin-1-yl]-2-[[(2~{S})-1-methylpyrrolidin-2-yl]methoxy]-6,8-dihydro-5~{H}-pyrido[3,4-d]pyrimidine, GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, ...
Authors:Shen, P, Yang, Y, Yang, Y, Zhang, L, Chen, C.-C, Guo, R.-T.
Deposit date:2021-05-25
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.13 Å)
Cite:KRAS(G12D) can be targeted by potent inhibitors via formation of salt bridge.
Cell Discov, 8, 2022
7EWB
DownloadVisualize
BU of 7ewb by Molmil
GDP-bound KRAS G12D in complex with TH-Z835
Descriptor: 4-[(1~{S},5~{R})-3,8-diazabicyclo[3.2.1]octan-3-yl]-7-(8-methylnaphthalen-1-yl)-2-[[(2~{S})-1-methylpyrrolidin-2-yl]methoxy]-6,8-dihydro-5~{H}-pyrido[3,4-d]pyrimidine, GUANOSINE-5'-DIPHOSPHATE, Isoform 2B of GTPase KRas, ...
Authors:Shen, P, Yang, Y, Yang, Y, Zhang, L, Chen, C.-C, Guo, R.-T.
Deposit date:2021-05-25
Release date:2021-12-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:KRAS(G12D) can be targeted by potent inhibitors via formation of salt bridge.
Cell Discov, 8, 2022
6KF1
DownloadVisualize
BU of 6kf1 by Molmil
Microbial Hormone-sensitive lipase- E53 mutant S162A
Descriptor: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, HEXANOIC ACID, ...
Authors:Xiaochen, Y, Zhengyang, L, Xuewei, X, Jixi, L.
Deposit date:2019-07-05
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.996 Å)
Cite:Functional and Structural Insights into Environmental Adaptation of a Novel Hormone-sensitive Lipase, E53, Obtained from Erythrobacter longus
To Be Published

238582

PDB entries from 2025-07-09

PDB statisticsPDBj update infoContact PDBjnumon