4V61

Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.

This is a large structure.

Summary for 4V61

Related3BBO
Integrates3BBO 3BBN
EMDB information1417
Descriptor16S rRNA, Ribosomal Protein S2, Ribosomal Protein S3, ... (53 entities in total)
Functional Keywordssmall ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex, ribosome
Biological sourceSpinacea oleracea (spinach)
Cellular locationPlastid, chloroplast P08242 P09595 P13788 P82129 P09597 P82278 P06506 P62128 Q9M3I4 P28807 P06508 Q9LE95 P06509 O49937 P82192 P31164 P12629 P09596 P17353 P82413 P28803 P24613 P09594 Q9LWB5 P27683 P28804 P28805 P82244 P23326
Plastid, chloroplast {ECO:0000269|Ref Q9ST69 P82403 Q9M3K7 P82163
Plastid, chloroplast {ECO:0000255|HAMAP- Rule:MF_00537, ECO:0000269|Ref P06507
Total number of polymer chains53
Total molecular weight2447890.7
Authors
Sharma, M.R.,Wilson, D.N.,Datta, P.P.,Barat, C.,Schluenzen, F.,Fucini, P.,Agrawal, R.K. (deposition date: 2007-11-09, release date: 2014-07-09, Last modification date: 2015-03-25)
Primary citation
Sharma, M.R.,Wilson, D.N.,Datta, P.P.,Barat, C.,Schluenzen, F.,Fucini, P.,Agrawal, R.K.
Cryo-EM study of the spinach chloroplast ribosome reveals the structural and functional roles of plastid-specific ribosomal proteins
Proc.Natl.Acad.Sci.Usa, 104:19315-19320, 2007
PubMed: 18042701 (PDB entries with the same primary citation)
DOI: 10.1073/pnas.0709856104
MImport into Mendeley
Experimental method
ELECTRON MICROSCOPY
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Structure validation

ClashscoreRamachandran outliersSidechain outliersRNA backbone246.4%6.6%0.66MetricValuePercentile RanksWorseBetterPercentile relative to all structuresPercentile relative to all EM structures

More Asymmetric unit images

Molmil generated image of 4v61
no rotation
Molmil generated image of 4v61
rotated about x axis by 90°
Molmil generated image of 4v61
rotated about y axis by 90°