4V61
Homology model for the Spinach chloroplast 30S subunit fitted to 9.4A cryo-EM map of the 70S chlororibosome.
This is a non-PDB format compatible entry.
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (AA) | 16S rRNA | polymer | 1491 | 483490.5 | 1 | GenBank (7636084) | Spinacea oleracea (spinach) | |
| 2 | B (AB) | Ribosomal Protein S2 | polymer | 231 | 26092.3 | 1 | UniProt (P08242) Pfam (PF00318) | Spinacea oleracea (spinach) | |
| 3 | C (AC) | Ribosomal Protein S3 | polymer | 218 | 24965.2 | 1 | UniProt (P09595) Pfam (PF00189) | Spinacea oleracea (spinach) | |
| 4 | D (AD) | Ribosomal Protein S4 | polymer | 201 | 23454.5 | 1 | UniProt (P13788) Pfam (PF00163) Pfam (PF01479) | Spinacea oleracea (spinach) | |
| 5 | E (AE) | Ribosomal Protein S5 | polymer | 308 | 33626.4 | 1 | UniProt (Q9ST69) Pfam (PF00333) Pfam (PF03719) | Spinacea oleracea (spinach) | |
| 6 | F (AF) | Ribosomal Protein S6 | polymer | 168 | 18870.4 | 1 | UniProt (P82403) Pfam (PF01250) | Spinacea oleracea (spinach) | |
| 7 | G (AG) | Ribosomal Protein S7 | polymer | 155 | 17378.3 | 1 | UniProt (P82129) Pfam (PF00177) | Spinacea oleracea (spinach) | |
| 8 | H (AH) | Ribosomal Protein S8 | polymer | 134 | 15527.3 | 1 | UniProt (P09597) Pfam (PF00410) | Spinacea oleracea (spinach) | |
| 9 | I (AI) | Ribosomal Protein S9 | polymer | 197 | 21350.8 | 1 | UniProt (P82278) Pfam (PF00380) | Spinacea oleracea (spinach) | |
| 10 | J (AJ) | Ribosomal Protein S10 | polymer | 197 | 21632.6 | 1 | Spinacea oleracea (spinach) | ||
| 11 | K (AK) | Ribosomal Protein S11 | polymer | 140 | 15085.7 | 1 | UniProt (P06506) Pfam (PF00411) | Spinacea oleracea (spinach) | |
| 12 | L (AL) | Ribosomal Protein S12 | polymer | 123 | 13794.3 | 1 | UniProt (P62128) Pfam (PF00164) | Spinacea oleracea (spinach) | |
| 13 | M (AM) | Ribosomal Protein S13 | polymer | 145 | 16306.1 | 1 | UniProt (P82163) Pfam (PF00416) | Spinacea oleracea (spinach) | |
| 14 | N (AN) | Ribosomal Protein S14 | polymer | 100 | 11809.8 | 1 | UniProt (P06507) Pfam (PF00253) | Spinacea oleracea (spinach) | |
| 15 | O (AO) | Ribosomal Protein S15 | polymer | 90 | 10778.8 | 1 | UniProt (Q9M3I4) Pfam (PF00312) | Spinacea oleracea (spinach) | |
| 16 | P (AP) | Ribosomal Protein S16 | polymer | 88 | 10454.2 | 1 | UniProt (P28807) Pfam (PF00886) | Spinacea oleracea (spinach) | |
| 17 | Q (AQ) | Ribosomal Protein S17 | polymer | 142 | 15828.7 | 1 | Spinacea oleracea (spinach) | ||
| 18 | R (AR) | Ribosomal Protein S18 | polymer | 103 | 12337.4 | 1 | UniProt (Q9M3K7) Pfam (PF01084) | Spinacea oleracea (spinach) | |
| 19 | S (AS) | Ribosomal Protein S19 | polymer | 92 | 10632.5 | 1 | UniProt (P06508) Pfam (PF00203) | Spinacea oleracea (spinach) | |
| 20 | T (AT) | Ribosomal Protein S20 | polymer | 202 | 21866.4 | 1 | Spinacea oleracea (spinach) | ||
| 21 | U (AU) | Ribosomal Protein S21 | polymer | 190 | 21701.2 | 1 | Spinacea oleracea (spinach) | ||
| 22 | V (BA) | 23S rRNA | polymer | 2810 | 911368.3 | 1 | EMBL (SOL400848) | Spinacea oleracea (spinach) | |
| 23 | W (BB) | 5S rRNA | polymer | 117 | 37743.4 | 1 | EMBL (SOL400848) | Spinacea oleracea (spinach) | |
| 24 | X (BC) | 4.8S rRNA | polymer | 103 | 33330.9 | 1 | EMBL (SOL400848) | Spinacea oleracea (spinach) | |
| 25 | Y (BD) | Ribosomal Protein L1 | polymer | 352 | 38681.5 | 1 | UniProt (Q9LE95) Pfam (PF00687) | Spinacea oleracea (spinach) | |
| 26 | Z (BE) | Ribosomal Protein L2 | polymer | 269 | 29480.2 | 1 | UniProt (P06509) Pfam (PF00181) Pfam (PF03947) | Spinacea oleracea (spinach) | |
| 27 | AA (BF) | Ribosomal Protein L3 | polymer | 259 | 28423.5 | 1 | Spinacea oleracea (spinach) | ||
| 28 | BA (BG) | Ribosomal Protein L4 | polymer | 293 | 32479.6 | 1 | UniProt (O49937) Pfam (PF00573) | Spinacea oleracea (spinach) | |
| 29 | CA (BH) | Ribosomal Protein L5 | polymer | 220 | 24248.2 | 1 | UniProt (P82192) Pfam (PF00281) Pfam (PF00673) | Spinacea oleracea (spinach) | |
| 30 | DA (BI) | Ribosomal Protein L6 | polymer | 223 | 24747.7 | 1 | Spinacea oleracea (spinach) | ||
| 31 | EA (BJ) | Ribosomal Protein L9 | polymer | 197 | 22169.8 | 1 | Spinacea oleracea (spinach) | ||
| 32 | FA (BK) | Ribosomal Protein L11 | polymer | 224 | 23690.0 | 1 | UniProt (P31164) Pfam (PF03946) Pfam (PF00298) | Spinacea oleracea (spinach) | |
| 33 | GA (BL) | Ribosomal Protein L13 | polymer | 250 | 28211.6 | 1 | UniProt (P12629) Pfam (PF00572) | Spinacea oleracea (spinach) | |
| 34 | HA (BM) | Ribosomal Protein L14 | polymer | 121 | 13484.7 | 1 | UniProt (P09596) Pfam (PF00238) | Spinacea oleracea (spinach) | |
| 35 | IA (BN) | Ribosomal Protein L15 | polymer | 257 | 27491.2 | 1 | Spinacea oleracea (spinach) | ||
| 36 | JA (BO) | Ribosomal Protein L16 | polymer | 135 | 15328.1 | 1 | UniProt (P17353) Pfam (PF00252) | Spinacea oleracea (spinach) | |
| 37 | KA (BP) | Ribosomal Protein L17 | polymer | 205 | 22983.9 | 1 | Spinacea oleracea (spinach) | ||
| 38 | LA (BQ) | Ribosomal Protein L18 | polymer | 161 | 17850.7 | 1 | Spinacea oleracea (spinach) | ||
| 39 | MA (BR) | Ribosomal Protein L19 | polymer | 233 | 26121.3 | 1 | UniProt (P82413) Pfam (PF01245) | Spinacea oleracea (spinach) | |
| 40 | NA (BS) | Ribosomal Protein L20 | polymer | 119 | 14617.3 | 1 | UniProt (P28803) Pfam (PF00453) | Spinacea oleracea (spinach) | |
| 41 | OA (BT) | Ribosomal Protein L21 | polymer | 257 | 28554.9 | 1 | UniProt (P24613) Pfam (PF00829) | Spinacea oleracea (spinach) | |
| 42 | PA (BU) | Ribosomal Protein L22 | polymer | 199 | 23276.7 | 1 | UniProt (P09594) Pfam (PF00237) | Spinacea oleracea (spinach) | |
| 43 | QA (BV) | Ribosomal Protein L23 | polymer | 198 | 21832.2 | 1 | UniProt (Q9LWB5) Pfam (PF00276) | Spinacea oleracea (spinach) | |
| 44 | RA (BW) | Ribosomal Protein L24 | polymer | 191 | 21481.1 | 1 | UniProt (P27683) Pfam (PF00467) Pfam (PF17136) | Spinacea oleracea (spinach) | |
| 45 | SA (BX) | Ribosomal Protein L27 | polymer | 198 | 21772.0 | 1 | Spinacea oleracea (spinach) | ||
| 46 | TA (BY) | Ribosomal Protein L28 | polymer | 151 | 16730.7 | 1 | Spinacea oleracea (spinach) | ||
| 47 | UA (BZ) | Ribosomal Protein L29 | polymer | 173 | 19415.5 | 1 | Spinacea oleracea (spinach) | ||
| 48 | VA (B1) | Ribosomal Protein L31 | polymer | 144 | 16060.9 | 1 | Spinacea oleracea (spinach) | ||
| 49 | WA (B2) | Ribosomal Protein L32 | polymer | 57 | 6651.0 | 1 | UniProt (P28804) | Spinacea oleracea (spinach) | |
| 50 | XA (B3) | Ribosomal Protein L33 | polymer | 66 | 7668.1 | 1 | UniProt (P28805) Pfam (PF00471) | Spinacea oleracea (spinach) | |
| 51 | YA (B4) | Ribosomal Protein L34 | polymer | 152 | 16126.6 | 1 | UniProt (P82244) Pfam (PF00468) | Spinacea oleracea (spinach) | |
| 52 | ZA (B5) | Ribosomal Protein L35 | polymer | 159 | 17376.3 | 1 | UniProt (P23326) Pfam (PF01632) | Spinacea oleracea (spinach) | |
| 53 | AB (B6) | Ribosomal Protein L36 | polymer | 104 | 11509.5 | 1 | Spinacea oleracea (spinach) |
Sequence modifications
AK: -1 - 138 (UniProt: P06506)
AR: 1 - 103 (UniProt: Q9M3K7)
BT: 0 - 256 (UniProt: P24613)
BU: 1 - 199 (UniProt: P09594)
| PDB | External Database | Details |
|---|---|---|
| Ser 21 | - | insertion |
| Ala 22 | - | insertion |
| PDB | External Database | Details |
|---|---|---|
| Glu 81 | - | insertion |
| Lys 82 | - | insertion |
| PDB | External Database | Details |
|---|---|---|
| Ile 122 | - | insertion |
| PDB | External Database | Details |
|---|---|---|
| Leu 126 | Lys 126 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 53 |
| Total formula weight | 2447890.7 | |
| All* | Total formula weight | 2447890.7 |
