3EVO

Crystal structure of the Mimivirus NDK +Kpn mutant complexed with dTDP

Summary for 3EVO

Related2b8p
DescriptorNucleoside diphosphate kinase, THYMIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... (4 entities in total)
Functional Keywordsphosphotransferase nucleotide binding, atp-binding, kinase, magnesium, metal-binding, nucleotide metabolism, nucleotide-binding, phosphoprotein, transferase
Biological sourceAcanthamoeba polyphaga mimivirus
Total number of polymer chains2
Total molecular weight34110.57
Authors
Jeudy, S.,Lartigue, A.,Claverie, J.M.,Abergel, C. (deposition date: 2008-10-13, release date: 2009-08-25, Last modification date: 2019-07-24)
Primary citation
Jeudy, S.,Lartigue, A.,Claverie, J.M.,Abergel, C.
Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase.
J.Virol., 83:7142-7150, 2009
PubMed: 19439473 (PDB entries with the same primary citation)
DOI: 10.1128/JVI.00511-09
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (1.5 Å)
?

Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.18340 2.1% 3.0%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution