3EVO
Crystal structure of the Mimivirus NDK +Kpn mutant complexed with dTDP
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B (A, B) | Nucleoside diphosphate kinase | polymer | 146 | 16628.8 | 2 | UniProt (Q5UQL3) Pfam (PF00334) | Acanthamoeba polyphaga mimivirus | NDP kinase, NDK |
2 | C, E (A, B) | THYMIDINE-5'-DIPHOSPHATE | non-polymer | 402.2 | 2 | Chemie (TYD) | |||
3 | D, F (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
4 | G, H (A, B) | water | water | 18.0 | 418 | Chemie (HOH) |
Sequence modifications
A, B: 2 - 141 (UniProt: Q5UQL3)
PDB | External Database | Details |
---|---|---|
Tyr -4 | - | expression tag |
Lys -3 | - | expression tag |
Lys -2 | - | expression tag |
Ala -1 | - | expression tag |
Gly 0 | - | expression tag |
Leu 1 | - | expression tag |
Thr 92 | - | SEE REMARK 999 |
Asn 93 | - | SEE REMARK 999 |
Pro 94 | - | SEE REMARK 999 |
Leu 95 | - | SEE REMARK 999 |
Ala 96 | Ile 92 | SEE REMARK 999 |
Ser 97 | Leu 93 | SEE REMARK 999 |
Ala 98 | Thr 94 | SEE REMARK 999 |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 2 |
Total formula weight | 33257.6 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 853.0 | |
All* | Total formula weight | 34110.6 |