2JLW
Dengue virus 4 NS3 helicase in complex with ssRNA2
Summary for 2JLW
Entry DOI | 10.2210/pdb2jlw/pdb |
Related | 2JLQ 2JLR 2JLS 2JLU 2JLV 2JLX 2JLY 2JLZ |
Descriptor | SERINE PROTEASE SUBUNIT NS3, 5'-R(*UP*AP*GP*AP*CP*UP*AP*AP*CP*AP*AP*CP*U)-3', PHOSPHATE ION, ... (5 entities in total) |
Functional Keywords | hydrolase-rna complex, rna-binding, flaviviruses, glycoprotein, dengue virus, transcription regulation, rna-directed rna polymerase, nucleotide-binding, viral nucleoprotein, cleavage on pair of basic residues, protease, hydrolase, transferase, atp-binding, endoplasmic reticulum, nucleotidyltransferase, phosphoprotein, capsid protein, rna replication, serine protease, envelope protein, ribonucleoprotein, ns3 helicase structure, multifunctional enzyme, ssrna, virion, nucleus, membrane, secreted, helicase, metal-binding, transmembrane, transcription, hydrolase/rna |
Biological source | DENGUE VIRUS 4 |
Cellular location | Capsid protein C: Virion (Potential). Peptide pr: Secreted (By similarity). Small envelope protein M: Virion membrane; Multi-pass membrane protein (By similarity). Envelope protein E: Virion membrane; Multi- pass membrane protein (By similarity). Non-structural protein 1: Secreted. Non-structural protein 2A-alpha: Host endoplasmic reticulum membrane; Multi-pass membrane protein (Potential). Non-structural protein 2A: Host endoplasmic reticulum membrane; Multi-pass membrane protein (Potential). Serine protease subunit NS2B: Host endoplasmic reticulum membrane; Peripheral membrane protein; Cytoplasmic side (By similarity). Serine protease NS3: Host endoplasmic reticulum membrane; Peripheral membrane protein; Cytoplasmic side (By similarity). Non-structural protein 4A: Host endoplasmic reticulum membrane; Multi-pass membrane protein (By similarity). Non-structural protein 4B: Host endoplasmic reticulum membrane; Multi-pass membrane protein (By similarity). RNA-directed RNA polymerase NS5: Host endoplasmic reticulum membrane; Peripheral membrane protein; Cytoplasmic side (By similarity): Q2YHF0 |
Total number of polymer chains | 4 |
Total formula weight | 111232.14 |
Authors | Luo, D.H.,Xu, T.,Watson, R.P.,Becker, D.S.,Sampath, A.,Jahnke, W.,Yeong, S.S.,Wang, C.H.,Lim, S.P.,Vasudevan, S.G.,Lescar, J. (deposition date: 2008-09-15, release date: 2008-11-25, Last modification date: 2023-12-13) |
Primary citation | Luo, D.H.,Xu, T.,Watson, R.P.,Becker, D.S.,Sampath, A.,Jahnke, W.,Yeong, S.S.,Wang, C.H.,Lim, S.P.,Strongin, A.,Vasudevan, S.G.,Lescar, J. Insights Into RNA Unwinding and ATP Hydrolysis by the Flavivirus Ns3 Protein Embo J., 27:3209-, 2008 Cited by PubMed: 19008861DOI: 10.1038/EMBOJ.2008.232 PDB entries with the same primary citation |
Experimental method | X-RAY DIFFRACTION (2.6 Å) |
Structure validation
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