Crystal Structure of Complex of a Hydroxyethylamine Inhibitor with HIV-1 Protease at 2.0A Resolution

Summary for 1ZSF

Related1FQX 1M0B 1LZQ 1IIQ 1Z8C 1ZBG 1ZJ7 1ZLF 1ZPK 1ZSR
Related PRD IDPRD_000385
DescriptorPROTEASE RETROPEPSIN, N-{(2R,3S)-3-[(tert-butoxycarbonyl)amino]-2-hydroxy-4-phenylbutyl}-L-phenylalanyl-L-alpha-glutamyl-L-phenylalaninamide (3 entities in total)
Functional Keywordshiv, protease, peptidomimetic inhibitor, hydrolase-hydrolase inhibitor complex, hydrolase/hydrolase inhibitor
Biological sourceHuman immunodeficiency virus 1
Cellular locationMatrix protein p17: Virion (Potential). Capsid protein p24: Virion (Potential). Nucleocapsid protein p7: Virion (Potential). Reverse transcriptase/ribonuclease H: Virion (Potential). Integrase: Virion (Potential) P03367
Total number of polymer chains2
Total molecular weight22343.34
Duskova, J.,Skalova, T.,Dohnalek, J.,Petrokova, H.,Hasek, J. (deposition date: 2005-05-24, release date: 2006-04-25, Last modification date: 2012-12-12)
Primary citation
Duskova, J.,Dohnalek, J.,Skalova, T.,Petrokova, H.,Vondrackova, E.,Hradilek, M.,Konvalinka, J.,Soucek, M.,Brynda, J.,Fabry, M.,Sedlacek, J.,Hasek, J.
On the role of the R configuration of the reaction-intermediate isostere in HIV-1 protease-inhibitor binding: X-ray structure at 2.0 A resolution.
Acta Crystallogr.,Sect.D, 62:489-497, 2006
PubMed: 16627941 (PDB entries with the same primary citation)
DOI: 10.1107/S0907444906006718
MImport into Mendeley
Experimental method

Structure validation

ClashscoreRamachandran outliersSidechain outliersRSRZ outliers21017.1%0.5%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
Download full validation reportDownload
PDB entries from 2020-07-29