8J1J
Cryo-EM structure of the AsCas12f-YHAM-sgRNAS3-5v7-target DNA
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, E (A, B) | Transposase IS605 OrfB C-terminal domain-containing protein | polymer | 432 | 49966.1 | 2 | UniProt (A0A2U3D0N8) Pfam (PF07282) | Sulfoacidibacillus thermotolerans | AsCas12f-YHAM |
| 2 | B (D) | DNA (38-MER) | polymer | 38 | 11694.6 | 1 | Sulfoacidibacillus thermotolerans | ||
| 3 | C (E) | DNA (38-MER) | polymer | 38 | 11689.5 | 1 | Sulfoacidibacillus thermotolerans | ||
| 4 | D (C) | RNA (118-MER) | polymer | 118 | 38288.8 | 1 | Sulfoacidibacillus thermotolerans | ||
| 5 | F, I (A, B) | ZINC ION | non-polymer | 65.4 | 2 | Chemie (ZN) | |||
| 6 | G, H (C) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) |
Sequence modifications
A, B: 1 - 422 (UniProt: A0A2U3D0N8)
| PDB | External Database | Details |
|---|---|---|
| Met -9 | - | initiating methionine |
| Gly -8 | - | expression tag |
| His -7 | - | expression tag |
| His -6 | - | expression tag |
| His -5 | - | expression tag |
| His -4 | - | expression tag |
| His -3 | - | expression tag |
| His -2 | - | expression tag |
| Gly -1 | - | expression tag |
| Ser 0 | - | expression tag |
| Tyr 48 | Phe 48 | engineered mutation |
| His 188 | Ser 188 | engineered mutation |
| Ala 232 | Val 232 | engineered mutation |
| Met 316 | Glu 316 | engineered mutation |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 5 |
| Total formula weight | 161605.1 | |
| Non-Polymers* | Number of molecules | 4 |
| Total formula weight | 179.4 | |
| All* | Total formula weight | 161784.6 |






