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8J1J

Cryo-EM structure of the AsCas12f-YHAM-sgRNAS3-5v7-target DNA

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E
(A, B)
Transposase IS605 OrfB C-terminal domain-containing proteinpolymer43249966.12UniProt (A0A2U3D0N8)
Pfam (PF07282)
Sulfoacidibacillus thermotoleransAsCas12f-YHAM
2B
(D)
DNA (38-MER)polymer3811694.61Sulfoacidibacillus thermotolerans
3C
(E)
DNA (38-MER)polymer3811689.51Sulfoacidibacillus thermotolerans
4D
(C)
RNA (118-MER)polymer11838288.81Sulfoacidibacillus thermotolerans
5F, I
(A, B)
ZINC IONnon-polymer65.42Chemie (ZN)
6G, H
(C)
MAGNESIUM IONnon-polymer24.32Chemie (MG)
Sequence modifications
A, B: 1 - 422 (UniProt: A0A2U3D0N8)
PDBExternal DatabaseDetails
Met -9-initiating methionine
Gly -8-expression tag
His -7-expression tag
His -6-expression tag
His -5-expression tag
His -4-expression tag
His -3-expression tag
His -2-expression tag
Gly -1-expression tag
Ser 0-expression tag
Tyr 48Phe 48engineered mutation
His 188Ser 188engineered mutation
Ala 232Val 232engineered mutation
Met 316Glu 316engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains5
Total formula weight161605.1
Non-Polymers*Number of molecules4
Total formula weight179.4
All*Total formula weight161784.6
*Water molecules are not included.

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PDB entries from 2026-01-21

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