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7MYZ

Structure of the full length 5-TM receptor CD47 bound to Fab B6H12

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(C, D)
Fusion protein of Leukocyte surface antigen CD47 an Soluble cytochrome b562polymer42146644.92UniProt (Q08722)
UniProt (P0ABE7)
Pfam (PF08204)
Pfam (PF04549)
Pfam (PF07361)
Homo sapiens (Human)Antigenic surface determinant protein OA3,Integrin-associated protein,IAP,Protein MER6,Cytochrome b-562,Antigenic surface determinant protein OA3,Integrin-associated protein,IAP,Protein MER6
2C, D
(H, I)
B6H12 Fab heavy chainpolymer22023264.12Homo sapiens (Human)
3E, F
(L, M)
B6H12 Fab light chainpolymer21323270.82Homo sapiens (Human)
4G, H, I, J, K...
(C, D)
2-acetamido-2-deoxy-beta-D-glucopyranosenon-polymer221.27Chemie (NAG)
5N
(L)
GLYCEROLnon-polymer92.11Chemie (GOL)
6O, P
(I, L)
waterwater18.03Chemie (HOH)
Sequence modifications
C, D: 1 - 147 (UniProt: Q08722)
C, D: 147 - 151 (UniProt: P0ABE7)
PDBExternal DatabaseDetails
Trp 147Met 29conflict
Ile 151His 124conflict
Leu 151-linker
C, D: 151 - 305 (UniProt: Q08722)
PDBExternal DatabaseDetails
His 306-expression tag
His 307-expression tag
His 308-expression tag
His 309-expression tag
His 310-expression tag
His 311-expression tag
His 312-expression tag
His 313-expression tag
His 314-expression tag
His 315-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight186359.5
Non-Polymers*Number of molecules8
Total formula weight1640.5
All*Total formula weight188000.1
*Water molecules are not included.

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PDB entries from 2025-06-11

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