7KMT
Structure of the yeast TRAPPIII-Ypt1(Rab1) complex
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | H | Trafficking protein particle complex subunit 23 | polymer | 219 | 24889.3 | 1 | UniProt (Q03784) Pfam (PF04099) In PDB | Saccharomyces cerevisiae (Baker's yeast) | TRAPP subunit 23,Transport protein particle 23 kDa subunit |
2 | J | Trafficking protein particle complex subunit 31 | polymer | 283 | 31755.7 | 1 | UniProt (Q03337) Pfam (PF04051) In PDB | Saccharomyces cerevisiae (Baker's yeast) | TRAPP subunit 31,Transport protein particle 31 kDa subunit |
3 | G | Trafficking protein particle complex subunit BET5 | polymer | 159 | 18453.9 | 1 | UniProt (Q03630) Pfam (PF04099) In PDB | Saccharomyces cerevisiae (Baker's yeast) | TRAPP subunit BET5,Transport protein particle 18 kDa subunit |
4 | I, F | Trafficking protein particle complex subunit BET3 | polymer | 193 | 22152.4 | 2 | UniProt (P36149) Pfam (PF04051) In PDB | Saccharomyces cerevisiae (Baker's yeast) | TRAPP subunit BET3,Transport protein particle 22 kDa subunit |
5 | E | Trafficking protein particle complex subunit 33 | polymer | 268 | 30786.2 | 1 | UniProt (Q99394) Pfam (PF04051) In PDB | Saccharomyces cerevisiae (Baker's yeast) | TRAPP subunit 33,Transport protein particle 33 kDa subunit |
6 | K | Trafficking protein particle complex subunit 20 | polymer | 175 | 19721.2 | 1 | UniProt (P38334) Pfam (PF04628) In PDB | Saccharomyces cerevisiae (Baker's yeast) | TRAPP subunit 20,Transport protein particle 20 kDa subunit |
7 | A | GTP-binding protein YPT1 | polymer | 206 | 23240.2 | 1 | UniProt (P01123) Pfam (PF00071) In PDB | Saccharomyces cerevisiae (Baker's yeast) | Protein YP2,Rab GTPase YPT1,Transport GTPase YPT1 |
8 | B | Trafficking protein particle complex III-specific subunit 85 | polymer | 717 | 82850.1 | 1 | UniProt (P46944) Pfam (PF12739) In PDB | Saccharomyces cerevisiae (Baker's yeast) | TRAPP III-specific subunit 85,Muddled meiosis protein 1,Sporulation protein GSG1,Transport protein particle 85 kDa subunit |
9 | I, F | PALMITIC ACID | non-polymer | 256.4 | 2 | Chemie (PLM) |
Sequence modifications
B: 1 - 698 (UniProt: P46944)
PDB | External Database | Details |
---|---|---|
Met -18 | - | initiating methionine |
Gly -17 | - | expression tag |
Ser -16 | - | expression tag |
Ser -15 | - | expression tag |
His -14 | - | expression tag |
His -13 | - | expression tag |
His -12 | - | expression tag |
His -11 | - | expression tag |
His -10 | - | expression tag |
His -9 | - | expression tag |
Ser -8 | - | expression tag |
Gln -7 | - | expression tag |
Glu -6 | - | expression tag |
Asn -5 | - | expression tag |
Leu -4 | - | expression tag |
Tyr -3 | - | expression tag |
Phe -2 | - | expression tag |
Gln -1 | - | expression tag |
Gly 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 9 |
Total formula weight | 276001.4 | |
Non-Polymers* | Number of molecules | 2 |
Total formula weight | 512.8 | |
All* | Total formula weight | 276514.2 |