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6WCD

Crystal Structure of Xenopus laevis APE2 Catalytic Domain

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(A)
DNA-(apurinic or apyrimidinic site) lyasepolymer35539855.61UniProt (Q6DDT4)
Pfam (PF03372)
Xenopus laevis (African clawed frog)APE2
2B
(A)
MAGNESIUM IONnon-polymer24.31Chemie (MG)
3C
(A)
2-(N-MORPHOLINO)-ETHANESULFONIC ACIDnon-polymer195.21Chemie (MES)
4D, F, G
(A)
1,4-BUTANEDIOLnon-polymer90.13Chemie (BU1)
5E
(A)
1,2-ETHANEDIOLnon-polymer62.11Chemie (EDO)
6H
(A)
waterwater18.0348Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains1
Total formula weight39855.6
Non-Polymers*Number of molecules6
Total formula weight552.0
All*Total formula weight40407.6
*Water molecules are not included.

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PDB entries from 2025-06-18

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