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6P08

Ternary structure of the E52D mutant of ANT-4'' with Neomycin, AMP and Pyrophosphate

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, DKanamycin nucleotidyltransferasepolymer25629121.92UniProt (P05058)
Pfam (PF07827)
In PDB
Bacillus sp.
2ANEOMYCINnon-polymer614.62Chemie (NMY)
3A, DPYROPHOSPHATEnon-polymer178.02Chemie (PPV)
4A, DMAGNESIUM IONnon-polymer24.34Chemie (MG)
5AADENOSINE MONOPHOSPHATEnon-polymer347.22Chemie (AMP)
6waterwater18.0228Chemie (HOH)
Sequence modifications
A, D: 1 - 253 (UniProt: P05058)
PDBExternal DatabaseDetails
Gly -2-expression tag
Ser -1-expression tag
His 0-expression tag
Asp 52Glu 52engineered mutation
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight58243.7
Non-Polymers*Number of molecules10
Total formula weight2376.9
All*Total formula weight60620.6
*Water molecules are not included.

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PDB entries from 2024-07-17

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