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6P08

Ternary structure of the E52D mutant of ANT-4'' with Neomycin, AMP and Pyrophosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2017-04-20
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)1.0332
Spacegroup nameP 21 21 21
Unit cell lengths59.750, 99.300, 101.490
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution49.650 - 2.270
R-factor0.196
Rwork0.194
R-free0.22460
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1kny
RMSD bond length0.006
RMSD bond angle0.993
Data reduction softwareiMOSFLM
Data scaling softwareAimless
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.13_2998: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]49.6502.300
High resolution limit [Å]2.2702.270
Rmerge0.1240.440
Rmeas0.1340.476
Rpim0.0500.243
Number of reflections305582512
<I/σ(I)>8.83.9
Completeness [%]97.694.6
Redundancy6.86.8
CC(1/2)0.9900.919
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP28518% PEG 8K, 0.1 M Tris pH 8.0, 0.1 M MgCl2

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PDB entries from 2024-07-17

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