6HZN
Crystal structure of human dermatan sulfate epimerase 1
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A (A) | Dermatan-sulfate epimerase | polymer | 761 | 87261.4 | 1 | UniProt (Q9UL01) Pfam (PF16332) | Homo sapiens (Human) | DS epimerase,Chondroitin-glucuronate 5-epimerase,Squamous cell carcinoma antigen recognized by T-cells 2,SART-2 |
2 | B (B) | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 424.4 | 1 | In PDB GlyTouCan (G42666HT) | |||
3 | C (C) | alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose | branched | 910.8 | 1 | In PDB GlyTouCan (G22768VO) | |||
4 | D, E (A) | 2-acetamido-2-deoxy-beta-D-glucopyranose | non-polymer | 221.2 | 2 | Chemie (NAG) | |||
5 | F (A) | MANGANESE (II) ION | non-polymer | 54.9 | 1 | Chemie (MN) | |||
6 | G, H (A) | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID | non-polymer | 195.2 | 2 | Chemie (MES) | |||
7 | I (A) | water | water | 18.0 | 153 | Chemie (HOH) |
Sequence modifications
A: 23 - 775 (UniProt: Q9UL01)
PDB | External Database | Details |
---|---|---|
His 776 | - | expression tag |
His 777 | - | expression tag |
His 778 | - | expression tag |
His 779 | - | expression tag |
His 780 | - | expression tag |
His 781 | - | expression tag |
His 782 | - | expression tag |
His 783 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 1 |
Total formula weight | 87261.4 | |
Branched | Number of molecules | 2 |
Total formula weight | 1335.2 | |
Non-Polymers* | Number of molecules | 5 |
Total formula weight | 887.8 | |
All* | Total formula weight | 89484.4 |