Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6HZN

Crystal structure of human dermatan sulfate epimerase 1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsMAX IV BEAMLINE BioMAX
Synchrotron siteMAX IV
BeamlineBioMAX
Temperature [K]100
Detector technologyPIXEL
Collection date2017-05-10
DetectorDECTRIS EIGER X 16M
Wavelength(s)0.97967
Spacegroup nameC 2 2 21
Unit cell lengths182.676, 213.914, 86.945
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.574 - 2.410
R-factor0.1772
Rwork0.176
R-free0.20890
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)CRANK2
RMSD bond length0.004
RMSD bond angle0.775
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.13_2998: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.5742.446
High resolution limit [Å]2.4102.410
Rmerge0.092
Rmeas0.097
Rpim0.030
Number of reflections66029
<I/σ(I)>15.71
Completeness [%]100.0
Redundancy10.5
CC(1/2)0.999
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5293.15Ammonium acetate 200 mM, MES 0.1 M (pH 6.5), Glycerol ethoxylate 30% v/v, Xylitol 6%

227111

PDB entries from 2024-11-06

PDB statisticsPDBj update infoContact PDBjnumon