6FI8
Crystal structure of the IS608 transposase in complex with left end 29-mer DNA hairpin and a 6-mer DNA representing the intact target site: pre-cleavage target capture complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B, G, H | Putative transposase | polymer | 159 | 18392.4 | 4 | UniProt (Q933Z0) Pfam (PF01797) In PDB | Helicobacter pylori (Campylobacter pylori) | Transposase,Transposase OrfA |
| 2 | C, D, I, J | DNA 29-MER (LE29) | polymer | 29 | 8933.8 | 4 | Helicobacter pylori | ||
| 3 | E, F, K, L | DNA 6-MER (T6') | polymer | 6 | 1768.2 | 4 | Helicobacter pylori | ||
| 4 | J, K, A, C, D... | CALCIUM ION | non-polymer | 40.1 | 16 | Chemie (CA) | |||
| 5 | water | water | 18.0 | 372 | Chemie (HOH) |
Sequence modifications
A, B, G, H: 2 - 155 (UniProt: Q933Z0)
| PDB | External Database | Details |
|---|---|---|
| Gly -3 | - | expression tag |
| Ser -2 | - | expression tag |
| Ala -1 | - | expression tag |
| Met 0 | - | expression tag |
| Ala 1 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 12 |
| Total formula weight | 116377.6 | |
| Non-Polymers* | Number of molecules | 16 |
| Total formula weight | 641.2 | |
| All* | Total formula weight | 117018.9 |
