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6FI8

Crystal structure of the IS608 transposase in complex with left end 29-mer DNA hairpin and a 6-mer DNA representing the intact target site: pre-cleavage target capture complex

Functional Information from GO Data
ChainGOidnamespacecontents
A0003677molecular_functionDNA binding
A0004803molecular_functiontransposase activity
A0006313biological_processDNA transposition
A0046872molecular_functionmetal ion binding
B0003677molecular_functionDNA binding
B0004803molecular_functiontransposase activity
B0006313biological_processDNA transposition
B0046872molecular_functionmetal ion binding
G0003677molecular_functionDNA binding
G0004803molecular_functiontransposase activity
G0006313biological_processDNA transposition
G0046872molecular_functionmetal ion binding
H0003677molecular_functionDNA binding
H0004803molecular_functiontransposase activity
H0006313biological_processDNA transposition
H0046872molecular_functionmetal ion binding
Functional Information from PDB Data
site_idAC1
Number of Residues8
Detailsbinding site for residue CA A 201
ChainResidue
AASP61
AHIS64
AHIS66
AHOH307
AHOH341
BGLN131
EDC-1
EDC0

site_idAC2
Number of Residues4
Detailsbinding site for residue CA A 202
ChainResidue
AILE128
BGLU57
DDC22
ALYS125

site_idAC3
Number of Residues7
Detailsbinding site for residue CA C 101
ChainResidue
BHOH204
BHOH205
BHOH206
CDG38
CDG39
CHOH209
CHOH226

site_idAC4
Number of Residues6
Detailsbinding site for residue CA C 102
ChainResidue
CHOH215
CHOH219
CHOH234
CHOH243
CHOH244
EHOH106

site_idAC5
Number of Residues5
Detailsbinding site for residue CA D 101
ChainResidue
AHOH305
DDG39
DHOH202
DHOH211
DHOH219

site_idAC6
Number of Residues5
Detailsbinding site for residue CA D 102
ChainResidue
DHOH218
DHOH220
DHOH222
FHOH203
JHOH236

site_idAC7
Number of Residues6
Detailsbinding site for residue CA F 101
ChainResidue
AHOH302
AHOH339
BHOH228
FDC0
FHOH205
FHOH206

site_idAC8
Number of Residues6
Detailsbinding site for residue CA G 201
ChainResidue
CDC23
CHOH236
CHOH237
GGLU57
GHOH317
HHOH312

site_idAC9
Number of Residues4
Detailsbinding site for residue CA G 202
ChainResidue
GLYS125
GILE128
HGLU57
JDC22

site_idAD1
Number of Residues4
Detailsbinding site for residue CA H 201
ChainResidue
CDT24
HGLN126
HGLU129
HHOH317

site_idAD2
Number of Residues7
Detailsbinding site for residue CA I 101
ChainResidue
HHOH316
IDG38
IDG39
IHOH206
IHOH209
IHOH214
IHOH234

site_idAD3
Number of Residues6
Detailsbinding site for residue CA I 102
ChainResidue
AHOH303
AHOH317
BGLN132
IDT43
IDA44
IHOH237

site_idAD4
Number of Residues7
Detailsbinding site for residue CA I 103
ChainResidue
CHOH235
IHOH211
IHOH226
IHOH230
IHOH248
KHOH301
KHOH306

site_idAD5
Number of Residues6
Detailsbinding site for residue CA J 101
ChainResidue
GHOH309
GHOH322
JDG39
JHOH211
JHOH213
JHOH215

site_idAD6
Number of Residues6
Detailsbinding site for residue CA J 102
ChainResidue
JHOH202
JHOH217
JHOH233
JHOH235
JHOH237
LHOH101

site_idAD7
Number of Residues6
Detailsbinding site for residue CA K 201
ChainResidue
GASP61
GHIS64
GHIS66
GHOH334
KDC-1
KDC0

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PDB entries from 2024-06-26

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