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6F5H

Crystal structure of USP7 in complex with a 4-hydroxypiperidine based inhibitor

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
Ubiquitin carboxyl-terminal hydrolase 7polymer35741505.92UniProt (Q93009)
Pfam (PF00443)
Homo sapiens (Human)Deubiquitinating enzyme 7,Herpesvirus-associated ubiquitin-specific protease,Ubiquitin thioesterase 7,Ubiquitin-specific-processing protease 7
2C, F, G
(A, B)
SULFATE IONnon-polymer96.13Chemie (SO4)
3D
(A)
GLYCEROLnon-polymer92.11Chemie (GOL)
4E, H
(A, B)
3-[[4-oxidanyl-1-[(3~{R})-3-phenylbutanoyl]piperidin-4-yl]methyl]-6-(2-pyrrolidin-1-ylethylamino)pyrimidin-4-onenon-polymer467.62Chemie (CQ5)
5I, J
(A, B)
waterwater18.0404Chemie (HOH)
Sequence modifications
A, B: 207 - 560 (UniProt: Q93009)
PDBExternal DatabaseDetails
His 561-expression tag
His 562-expression tag
His 563-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight83011.7
Non-Polymers*Number of molecules6
Total formula weight1315.5
All*Total formula weight84327.2
*Water molecules are not included.

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PDB entries from 2025-08-06

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