5YWT
Crystal structure of TREX1 in complex with a duplex DNA with 3' overhang
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B | Three-prime repair exonuclease 1 | polymer | 276 | 29876.9 | 2 | UniProt (Q91XB0) In PDB | Mus musculus (Mouse) | 3'-5' exonuclease TREX1,DNase III |
2 | D, C | DNA (5'-D(*GP*GP*CP*CP*CP*T)-3') | polymer | 19 | 5763.7 | 2 | Homo sapiens | ||
3 | A, B | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
4 | A, B | COBALT (II) ION | non-polymer | 58.9 | 3 | Chemie (CO) | |||
5 | water | water | 18.0 | 568 | Chemie (HOH) |
Sequence modifications
A, B: 1 - 242 (UniProt: Q91XB0)
PDB | External Database | Details |
---|---|---|
Met -33 | - | expression tag |
Gly -32 | - | expression tag |
Ser -31 | - | expression tag |
Ser -30 | - | expression tag |
His -29 | - | expression tag |
His -28 | - | expression tag |
His -27 | - | expression tag |
His -26 | - | expression tag |
His -25 | - | expression tag |
His -24 | - | expression tag |
Ser -23 | - | expression tag |
Ser -22 | - | expression tag |
Gly -21 | - | expression tag |
Leu -20 | - | expression tag |
Val -19 | - | expression tag |
Pro -18 | - | expression tag |
Arg -17 | - | expression tag |
Gly -16 | - | expression tag |
Ser -15 | - | expression tag |
His -14 | - | expression tag |
Met -13 | - | expression tag |
Ala -12 | - | expression tag |
Ser -11 | - | expression tag |
Met -10 | - | expression tag |
Thr -9 | - | expression tag |
Gly -8 | - | expression tag |
Gly -7 | - | expression tag |
Gln -6 | - | expression tag |
Gln -5 | - | expression tag |
Met -4 | - | expression tag |
Gly -3 | - | expression tag |
Arg -2 | - | expression tag |
Gly -1 | - | expression tag |
Ser 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 71281.2 | |
Non-Polymers* | Number of molecules | 7 |
Total formula weight | 274.0 | |
All* | Total formula weight | 71555.2 |