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5YPL

Crystal structure of NDM-1 bound to hydrolyzed imipenem representing an EP complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, BMetallo-beta-lactamase NDM-1polymer24225631.82UniProt (A0A0A7Y424)
Pfam (PF00753)
UniProt (by SIFTS) (E5KIY2)
In PDB
Escherichia coli
2A, BZINC IONnon-polymer65.44Chemie (ZN)
3A, B(2R,4S)-2-[(1S,2R)-1-carboxy-2-hydroxypropyl]-4-[(2-{[(Z)-iminomethyl]amino}ethyl)sulfanyl]-3,4-dihydro-2H-pyrrole-5-ca rboxylic acidnon-polymer317.42Chemie (HIW)
4ASULFATE IONnon-polymer96.11Chemie (SO4)
5BCHLORIDE IONnon-polymer35.51Chemie (CL)
6waterwater18.0371Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains2
Total formula weight51263.6
Non-Polymers*Number of molecules8
Total formula weight1027.9
All*Total formula weight52291.5
*Water molecules are not included.

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PDB entries from 2024-04-24

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