5YPL
Crystal structure of NDM-1 bound to hydrolyzed imipenem representing an EP complex
Functional Information from GO Data
| Chain | GOid | namespace | contents |
| A | 0008800 | molecular_function | beta-lactamase activity |
| A | 0016787 | molecular_function | hydrolase activity |
| A | 0017001 | biological_process | antibiotic catabolic process |
| A | 0042597 | cellular_component | periplasmic space |
| A | 0046677 | biological_process | response to antibiotic |
| A | 0046872 | molecular_function | metal ion binding |
| B | 0008800 | molecular_function | beta-lactamase activity |
| B | 0016787 | molecular_function | hydrolase activity |
| B | 0017001 | biological_process | antibiotic catabolic process |
| B | 0042597 | cellular_component | periplasmic space |
| B | 0046677 | biological_process | response to antibiotic |
| B | 0046872 | molecular_function | metal ion binding |
Functional Information from PDB Data
| site_id | AC1 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 301 |
| Chain | Residue |
| A | HIS120 |
| A | HIS122 |
| A | HIS189 |
| A | HIW303 |
| site_id | AC2 |
| Number of Residues | 4 |
| Details | binding site for residue ZN A 302 |
| Chain | Residue |
| A | ASP124 |
| A | CYS208 |
| A | HIS250 |
| A | HIW303 |
| site_id | AC3 |
| Number of Residues | 11 |
| Details | binding site for residue HIW A 303 |
| Chain | Residue |
| A | ASP124 |
| A | HIS189 |
| A | CYS208 |
| A | LYS211 |
| A | GLY219 |
| A | ASN220 |
| A | HIS250 |
| A | ZN301 |
| A | ZN302 |
| B | GLY69 |
| A | HIS122 |
| site_id | AC4 |
| Number of Residues | 3 |
| Details | binding site for residue SO4 A 304 |
| Chain | Residue |
| A | ARG234 |
| A | THR260 |
| A | ARG264 |
| site_id | AC5 |
| Number of Residues | 4 |
| Details | binding site for residue ZN B 301 |
| Chain | Residue |
| B | HIS120 |
| B | HIS122 |
| B | HIS189 |
| B | HIW303 |
| site_id | AC6 |
| Number of Residues | 4 |
| Details | binding site for residue ZN B 302 |
| Chain | Residue |
| B | ASP124 |
| B | CYS208 |
| B | HIS250 |
| B | HIW303 |
| site_id | AC7 |
| Number of Residues | 13 |
| Details | binding site for residue HIW B 303 |
| Chain | Residue |
| A | GLY69 |
| A | PHE70 |
| B | TRP93 |
| B | HIS120 |
| B | HIS122 |
| B | ASP124 |
| B | HIS189 |
| B | LYS211 |
| B | GLY219 |
| B | ASN220 |
| B | HIS250 |
| B | ZN301 |
| B | ZN302 |
