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5VAJ

BhRNase H - amide-RNA/DNA complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A
(C)
RNA (5'-R(*GP*AP*CP*AP*CP*CP*UP*GP*AP*(URU)P*C)-3')polymer113733.41synthetic construct
2B
(D)
DNA (5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3')polymer123702.41synthetic construct
3C, D
(A, B)
Ribonuclease Hpolymer14216329.52UniProt (Q9KEI9)Bacillus haloduransRNase H
4E, F, G, H, I...
(C, D, A, B)
GLYCEROLnon-polymer92.19Chemie (GOL)
5L, M, Q, R
(A, B)
MAGNESIUM IONnon-polymer24.34Chemie (MG)
6N, S, T
(A, B)
ACETATE IONnon-polymer59.03Chemie (ACT)
7U, V, W, X
(C, D, A, B)
waterwater18.0214Chemie (HOH)
Sequence modifications
A, B: 59 - 196 (UniProt: Q9KEI9)
PDBExternal DatabaseDetails
Gly 55-expression tag
Ser 56-expression tag
His 57-expression tag
Met 58-expression tag
Asn 132Asp 132conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight40094.8
Non-Polymers*Number of molecules16
Total formula weight1103.2
All*Total formula weight41197.9
*Water molecules are not included.

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PDB entries from 2026-01-21

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