5VAJ
BhRNase H - amide-RNA/DNA complex
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A (C) | RNA (5'-R(*GP*AP*CP*AP*CP*CP*UP*GP*AP*(URU)P*C)-3') | polymer | 11 | 3733.4 | 1 | synthetic construct | ||
| 2 | B (D) | DNA (5'-D(*GP*AP*AP*TP*CP*AP*GP*GP*TP*GP*TP*C)-3') | polymer | 12 | 3702.4 | 1 | synthetic construct | ||
| 3 | C, D (A, B) | Ribonuclease H | polymer | 142 | 16329.5 | 2 | UniProt (Q9KEI9) | Bacillus halodurans | RNase H |
| 4 | E, F, G, H, I... (C, D, A, B) | GLYCEROL | non-polymer | 92.1 | 9 | Chemie (GOL) | |||
| 5 | L, M, Q, R (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 4 | Chemie (MG) | |||
| 6 | N, S, T (A, B) | ACETATE ION | non-polymer | 59.0 | 3 | Chemie (ACT) | |||
| 7 | U, V, W, X (C, D, A, B) | water | water | 18.0 | 214 | Chemie (HOH) |
Sequence modifications
A, B: 59 - 196 (UniProt: Q9KEI9)
| PDB | External Database | Details |
|---|---|---|
| Gly 55 | - | expression tag |
| Ser 56 | - | expression tag |
| His 57 | - | expression tag |
| Met 58 | - | expression tag |
| Asn 132 | Asp 132 | conflict |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 40094.8 | |
| Non-Polymers* | Number of molecules | 16 |
| Total formula weight | 1103.2 | |
| All* | Total formula weight | 41197.9 |






