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5L2X

Crystal structure of human PrimPol ternary complex

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, D
(A, B)
DNA-directed primase/polymerase proteinpolymer35340909.32UniProt (Q96LW4)
Pfam (PF01896)
Homo sapiens (Human)hPrimpol1,Coiled-coil domain-containing protein 111
2B, E
(C, G)
DNA (5'-D(P*TP*CP*GP*CP*(5IU)P*AP*CP*C)-3')polymer175149.12Homo sapiens
3C, F
(D, H)
DNA (5'-D(P*GP*GP*TP*AP*GP*CP*(DDG))-3')polymer134087.72Homo sapiens
4G, I
(A, B)
2'-DEOXYADENOSINE 5'-TRIPHOSPHATEnon-polymer491.22Chemie (DTP)
5H, J
(A, B)
CALCIUM IONnon-polymer40.12Chemie (CA)
6K, L, M, N, O
(A, C, B, G, H)
waterwater18.098Chemie (HOH)
Sequence modifications
A, B: 1 - 353 (UniProt: Q96LW4)
PDBExternal DatabaseDetails
Arg 168Gln 168conflict
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains6
Total formula weight100292.2
Non-Polymers*Number of molecules4
Total formula weight1062.5
All*Total formula weight101354.7
*Water molecules are not included.

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PDB entries from 2025-06-18

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