5IRX
Structure of TRPV1 in complex with DkTx and RTX, determined in lipid nanodisc
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C, D | Transient receptor potential cation channel subfamily V member 1 | polymer | 636 | 72959.3 | 4 | UniProt (O35433) Pfam (PF00023) Pfam (PF00520) In PDB | Rattus norvegicus (Rat) | TrpV1, Capsaicin receptor, Osm-9-like TRP channel 1, OTRPC1, Vanilloid receptor 1, Vanilloid receptor type 1-like |
2 | E, F | Tau-theraphotoxin-Hs1a | polymer | 75 | 8553.0 | 2 | UniProt (P0CH43) In PDB | Haplopelma schmidti (Chinese bird spider) | Tau-TRTX-Hs1a, Double-knot toxin, DkTx |
3 | A, B, C, D | (4R,7S)-4-hydroxy-N,N,N-trimethyl-4,9-dioxo-7-[(pentanoyloxy)methyl]-3,5,8-trioxa-4lambda~5~-phosphatetradecan-1-aminium | non-polymer | 440.5 | 4 | Chemie (6O8) | |||
4 | A, B, C, D, E... | (2S)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(hexanoyloxy)propyl hexanoate | non-polymer | 411.4 | 8 | Chemie (6OE) | |||
5 | A, B, C, D | resiniferatoxin | non-polymer | 628.7 | 4 | Chemie (6EU) | |||
6 | D, E, F | (2S)-2-(acetyloxy)-3-{[(R)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}propyl pentanoate | non-polymer | 341.3 | 4 | Chemie (6O9) |
Sequence modifications
A, B, C, D: 110 - 603 (UniProt: O35433)
A, B, C, D: 627 - 764 (UniProt: O35433)
PDB | External Database | Details |
---|---|---|
Ala 106 | - | expression tag |
Met 107 | - | expression tag |
Gly 108 | - | expression tag |
Ser 109 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 6 |
Total formula weight | 308943.2 | |
Non-Polymers* | Number of molecules | 20 |
Total formula weight | 8933.4 | |
All* | Total formula weight | 317876.6 |