4PUQ
Mus Musculus Tdp2 reaction product complex with 5'-phosphorylated RNA/DNA, glycerol, and Mg2+
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B (A, B) | Tyrosyl-DNA phosphodiesterase 2 | polymer | 256 | 28890.2 | 2 | UniProt (Q9JJX7) Pfam (PF03372) | Mus musculus (mouse) | Tyr-DNA phosphodiesterase 2, 5'-tyrosyl-DNA phosphodiesterase, 5'-Tyr-DNA phosphodiesterase, TRAF and TNF receptor-associated protein |
| 2 | C, D (C, D) | DNA/RNA hybrid | polymer | 9 | 2731.8 | 2 | |||
| 3 | E, F (A, B) | MAGNESIUM ION | non-polymer | 24.3 | 2 | Chemie (MG) | |||
| 4 | G, H, J (B, D) | GLYCEROL | non-polymer | 92.1 | 3 | Chemie (GOL) | |||
| 5 | I (D) | ACETATE ION | non-polymer | 59.0 | 1 | Chemie (ACT) | |||
| 6 | K, L, M, N (A, B, C, D) | water | water | 18.0 | 634 | Chemie (HOH) |
Sequence modifications
A, B: 118 - 370 (UniProt: Q9JJX7)
| PDB | External Database | Details |
|---|---|---|
| Ser 115 | - | expression tag |
| Asn 116 | - | expression tag |
| Gly 117 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 4 |
| Total formula weight | 63243.9 | |
| Non-Polymers* | Number of molecules | 6 |
| Total formula weight | 383.9 | |
| All* | Total formula weight | 63627.8 |
