4OGR
crystal structure of P-TEFb complex with AFF4 and Tat
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, E, I | Cyclin-dependent kinase 9 | polymer | 332 | 38226.3 | 3 | UniProt (P50750) Pfam (PF00069) In PDB | Homo sapiens (human) | C-2K, Cell division cycle 2-like protein kinase 4, Cell division protein kinase 9, Serine/threonine-protein kinase PITALRE, Tat-associated kinase complex catalytic subunit |
2 | B, F, K | Cyclin-T1 | polymer | 264 | 30619.0 | 3 | UniProt (O60563) Pfam (PF00134) Pfam (PF21797) In PDB | Homo sapiens (human) | CycT1, Cyclin-T |
3 | C, G, L | AF4/FMR2 family member 4 | polymer | 75 | 8789.8 | 3 | UniProt (Q9UHB7) In PDB | Homo sapiens (human) | ALL1-fused gene from chromosome 5q31 protein, Protein AF-5q31, Major CDK9 elongation factor-associated protein |
4 | D, H, M | Protein Tat | polymer | 58 | 6784.1 | 3 | UniProt (P69698) Pfam (PF00539) In PDB | Human immunodeficiency virus type 1 (HXB3 ISOLATE) (HIV-1) | Transactivating regulatory protein |
5 | A, E, I | ADENOSINE | non-polymer | 267.2 | 3 | Chemie (ADN) | |||
6 | D, H, M | ZINC ION | non-polymer | 65.4 | 6 | Chemie (ZN) | |||
7 | water | water | 18.0 | 37 | Chemie (HOH) |
Sequence modifications
A, E, I: 1 - 330 (UniProt: P50750)
C, G, L: 2 - 73 (UniProt: Q9UHB7)
D, H, M: 1 - 57 (UniProt: P69698)
PDB | External Database | Details |
---|---|---|
Gly -1 | - | expression tag |
His 0 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ser -1 | - | expression tag |
Asn 0 | - | expression tag |
Ala 1 | - | expression tag |
PDB | External Database | Details |
---|---|---|
Ace 0 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 12 |
Total formula weight | 253257.5 | |
Non-Polymers* | Number of molecules | 9 |
Total formula weight | 1194.2 | |
All* | Total formula weight | 254451.6 |