4IOX
The structure of the herpes simplex virus DNA-packaging motor pUL15 C-terminal nuclease domain provides insights into cleavage of concatemeric viral genome precursors
Entity
Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
1 | A, B, C (A, B, C) | Tripartite terminase subunit UL15 | polymer | 286 | 30918.9 | 3 | UniProt (P04295) Pfam (PF02499) | Human herpesvirus 1 (HHV-1) | DNA-packaging protein UL15, Terminase large subunit |
2 | D (D) | peptide | polymer | 6 | 528.6 | 1 | Human herpesvirus 1 (HHV-1) | ||
3 | E (A) | TRIETHYLENE GLYCOL | non-polymer | 150.2 | 1 | Chemie (PGE) | |||
4 | F (A) | DI(HYDROXYETHYL)ETHER | non-polymer | 106.1 | 1 | Chemie (PEG) | |||
5 | G (A) | TETRAETHYLENE GLYCOL | non-polymer | 194.2 | 1 | Chemie (PG4) | |||
6 | H (A) | ACETATE ION | non-polymer | 59.0 | 1 | Chemie (ACT) | |||
7 | I, J, K (A, B, C) | water | water | 18.0 | 46 | Chemie (HOH) |
Sequence modifications
A, B, C: 471 - 735 (UniProt: P04295)
PDB | External Database | Details |
---|---|---|
Met 450 | - | expression tag |
Gly 451 | - | expression tag |
Ser 452 | - | expression tag |
Ser 453 | - | expression tag |
His 454 | - | expression tag |
His 455 | - | expression tag |
His 456 | - | expression tag |
His 457 | - | expression tag |
His 458 | - | expression tag |
His 459 | - | expression tag |
Ser 460 | - | expression tag |
Ser 461 | - | expression tag |
Gly 462 | - | expression tag |
Leu 463 | - | expression tag |
Val 464 | - | expression tag |
Pro 465 | - | expression tag |
Arg 466 | - | expression tag |
Gly 467 | - | expression tag |
Ser 468 | - | expression tag |
His 469 | - | expression tag |
Met 470 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
Polymers | Number of chains | 4 |
Total formula weight | 93285.4 | |
Non-Polymers* | Number of molecules | 4 |
Total formula weight | 509.6 | |
All* | Total formula weight | 93794.9 |