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4IOX

The structure of the herpes simplex virus DNA-packaging motor pUL15 C-terminal nuclease domain provides insights into cleavage of concatemeric viral genome precursors

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, C
(A, B, C)
Tripartite terminase subunit UL15polymer28630918.93UniProt (P04295)
Pfam (PF02499)
Human herpesvirus 1 (HHV-1)DNA-packaging protein UL15, Terminase large subunit
2D
(D)
peptidepolymer6528.61Human herpesvirus 1 (HHV-1)
3E
(A)
TRIETHYLENE GLYCOLnon-polymer150.21Chemie (PGE)
4F
(A)
DI(HYDROXYETHYL)ETHERnon-polymer106.11Chemie (PEG)
5G
(A)
TETRAETHYLENE GLYCOLnon-polymer194.21Chemie (PG4)
6H
(A)
ACETATE IONnon-polymer59.01Chemie (ACT)
7I, J, K
(A, B, C)
waterwater18.046Chemie (HOH)
Sequence modifications
A, B, C: 471 - 735 (UniProt: P04295)
PDBExternal DatabaseDetails
Met 450-expression tag
Gly 451-expression tag
Ser 452-expression tag
Ser 453-expression tag
His 454-expression tag
His 455-expression tag
His 456-expression tag
His 457-expression tag
His 458-expression tag
His 459-expression tag
Ser 460-expression tag
Ser 461-expression tag
Gly 462-expression tag
Leu 463-expression tag
Val 464-expression tag
Pro 465-expression tag
Arg 466-expression tag
Gly 467-expression tag
Ser 468-expression tag
His 469-expression tag
Met 470-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight93285.4
Non-Polymers*Number of molecules4
Total formula weight509.6
All*Total formula weight93794.9
*Water molecules are not included.

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PDB entries from 2024-11-13

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