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4A69

Structure of HDAC3 bound to corepressor and inositol tetraphosphate

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B
(A, B)
HISTONE DEACETYLASE 3,polymer37642916.52UniProt (O15379)
Pfam (PF00850)
HOMO SAPIENS (HUMAN)HD3, RPD3-2, SMAP45, HDAC3
2C, D
(C, D)
NUCLEAR RECEPTOR COREPRESSOR 2polymer9411309.22UniProt (Q9Y618)
Pfam (PF00249)
HOMO SAPIENS (HUMAN)N-COR2, CTG REPEAT PROTEIN 26, SMAP270, SILENCING MEDIATOR OF RETINOIC ACID AND THYROID HORMONE RECEPTOR, SMRT, T3 RECEPTOR-ASSOCIATING FACTOR, TRAC, THYROID-\,RETINOIC-ACID-RECEPTOR-ASSOCIATED COREPRESSOR
3E, K
(A, B)
ZINC IONnon-polymer65.42Chemie (ZN)
4F, L
(A, B)
ACETATE IONnon-polymer59.02Chemie (ACT)
5G, H, M, N
(A, B)
POTASSIUM IONnon-polymer39.14Chemie (K)
6I, J, O, P
(A, B)
GLYCEROLnon-polymer92.14Chemie (GOL)
7Q, R
(C, D)
D-MYO INOSITOL 1,4,5,6 TETRAKISPHOSPHATEnon-polymer500.12Chemie (I0P)
8S, T, U, V
(A, B, C, D)
waterwater18.0347Chemie (HOH)
Sequence modifications
C, D: 389 - 480 (UniProt: Q9Y618)
PDBExternal DatabaseDetails
Gly 387-expression tag
Ala 388-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight108451.4
Non-Polymers*Number of molecules14
Total formula weight1773.8
All*Total formula weight110225.3
*Water molecules are not included.

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PDB entries from 2025-07-16

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