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3SWC

GLP (G9a-like protein) SET domain in complex with Dnmt3aK44me2 peptide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, B)
Histone-lysine N-methyltransferase EHMT1polymer28532830.22UniProt (Q9H9B1)
Pfam (PF05033)
Pfam (PF00856)
Homo sapiens (human)Euchromatic histone-lysine N-methyltransferase 1, Eu-HMTase1, G9a-like protein 1, GLP, GLP1, Histone H3-K9 methyltransferase 5, H3-K9-HMTase 5, Lysine N-methyltransferase 1D
2B, D
(P, Q)
DNA (cytosine-5)-methyltransferase 3Apolymer121286.52UniProt (O88508)Mus musculusDnmt3a, DNA methyltransferase MmuIIIA, DNA MTase MmuIIIA, M.MmuIIIA
3E, F, G, H, J...
(A, B)
ZINC IONnon-polymer65.48Chemie (ZN)
4I, N
(A, B)
S-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.42Chemie (SAH)
5O, P, Q, R
(A, P, B, Q)
waterwater18.0170Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight68233.5
Non-Polymers*Number of molecules10
Total formula weight1292.1
All*Total formula weight69525.5
*Water molecules are not included.

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PDB entries from 2025-06-18

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