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3SWC

GLP (G9a-like protein) SET domain in complex with Dnmt3aK44me2 peptide

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, C
(A, B)
Histone-lysine N-methyltransferase EHMT1polymer28532830.22UniProt (Q9H9B1)
Pfam (PF05033)
Pfam (PF00856)
Homo sapiens (human)Euchromatic histone-lysine N-methyltransferase 1, Eu-HMTase1, G9a-like protein 1, GLP, GLP1, Histone H3-K9 methyltransferase 5, H3-K9-HMTase 5, Lysine N-methyltransferase 1D
2B, D
(P, Q)
DNA (cytosine-5)-methyltransferase 3Apolymer121286.52UniProt (O88508)Mus musculusDnmt3a, DNA methyltransferase MmuIIIA, DNA MTase MmuIIIA, M.MmuIIIA
3E, F, G, H, J...
(A, B)
ZINC IONnon-polymer65.48Chemie (ZN)
4I, N
(A, B)
S-ADENOSYL-L-HOMOCYSTEINEnon-polymer384.42Chemie (SAH)
PubChem (16760024)
PubChem (193)
PubChem (13792)
PubChem (177678424)
PubChem (189149)
PubChem (439155)
PubChem (25210495)
PubChem (21125603)
PubChem (44361184)
PubChem (25203782)
PubChem (46936206)
PubChem (50989525)
PubChem (51380914)
PubChem (52224398)
PubChem (57544532)
PubChem (52224400)
PubChem (59046843)
PubChem (59170628)
PubChem (59576228)
PubChem (66805708)
PubChem (5284331)
PubChem (70689219)
PubChem (70702054)
PubChem (70832431)
PubChem (71170554)
PubChem (13231890)
PubChem (6419189)
PubChem (118374891)
PubChem (118560068)
PubChem (126969526)
PubChem (129105892)
PubChem (164157219)
PubChem (143518505)
PubChem (154578335)
PubChem (163054214)
PubChem (163335525)
5O, P, Q, R
(A, P, B, Q)
waterwater18.0170Chemie (HOH)
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains4
Total formula weight68233.5
Non-Polymers*Number of molecules10
Total formula weight1292.1
All*Total formula weight69525.5
*Water molecules are not included.

251422

PDB entries from 2026-04-01

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