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3REL

2.7 Angstrom Crystal Structure of the Nucleosome Core Particle Assembled with a 146 bp Alpha-Satellite DNA (NCP146b) Derivatized with Triamminechloroplatinum(II) Chloride

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, E
(A, E)
Histone H3.2polymer13515303.92UniProt (P84233)
Pfam (PF00125)
Xenopus laevis (clawed frog common platanna platanna)
2B, F
(B, F)
Histone H4polymer10211263.22UniProt (P62799)
Pfam (PF15511)
Xenopus laevis (clawed frog common platanna platanna)
3C, G
(C, G)
Histone H2Apolymer12913978.22UniProt (P06897)
Pfam (PF00125)
Pfam (PF16211)
Xenopus laevis (clawed frog common platanna platanna)
4D, H
(D, H)
Histone H2B 1.1polymer12213524.82UniProt (P02281)
Pfam (PF00125)
Xenopus laevis (clawed frog common platanna platanna)H2B1
5I, J
(I, J)
DNA (146-MER)polymer14645054.82Homo sapiens
6K, N
(A, D)
MANGANESE (II) IONnon-polymer54.92Chemie (MN)
7AA, AB, BA, BB, CA...
(I, J, B, F)
PLATINUM (II) IONnon-polymer195.148Chemie (PT)
8M, O, Q
(C, D, G)
SULFATE IONnon-polymer96.13Chemie (SO4)
Sequence modifications
A, E: 1 - 135 (UniProt: P84233)
PDBExternal DatabaseDetails
Ala 102Gly 103variant
C, G: 1 - 129 (UniProt: P06897)
PDBExternal DatabaseDetails
Arg 99Gly 100variant
Ser 123Ala 124variant
D, H: 1 - 122 (UniProt: P02281)
PDBExternal DatabaseDetails
Thr 29Ser 33variant
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains10
Total formula weight198250.0
Non-Polymers*Number of molecules53
Total formula weight9761.8
All*Total formula weight208011.8
*Water molecules are not included.

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PDB entries from 2025-06-11

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