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3F9K

Two domain fragment of HIV-2 integrase in complex with LEDGF IBD

Entity
Entity IDChain IDDescriptionTypeChain lengthFormula weightNumber of moleculesDB Name (Accession)Biological sourceDescriptive keywords
1A, B, E, F, I...Integrasepolymer21023672.024UniProt (P04584)
Pfam (PF02022)
Pfam (PF00665)
In PDB
Human immunodeficiency virus type 2 (HIV-2)
2C, G, K, O, S...PC4 and SFRS1-interacting proteinpolymer9511076.012UniProt (O75475)
Pfam (PF11467)
In PDB
Homo sapiens (Human)LEDGF, Lens epithelium-derived growth factor, Transcriptional coactivator p75/p52, Dense fine speckles 70 kDa protein, DFS 70, CLL-associated antigen KW-7
3Q, p, R, s, U...ZINC IONnon-polymer65.424Chemie (ZN)
4Q, p, R, s, U...MAGNESIUM IONnon-polymer24.324Chemie (MG)
Sequence modifications
A, B, E, F, I, J, M, N, Q, R, U, V, Y, Z, c, d, g, h, k, l, o, p, s, t: 2 - 209 (UniProt: P04584)
PDBExternal DatabaseDetails
Met 0-expression tag
Val 1-expression tag
Val 180Ile 1351variant
C, G, K, O, S, W, a, e, i, m, q, u: 347 - 435 (UniProt: O75475)
PDBExternal DatabaseDetails
Leu 436-expression tag
Glu 437-expression tag
Val 438-expression tag
Leu 439-expression tag
Phe 440-expression tag
Gln 441-expression tag
Sequence viewer
Contents of the asymmetric unit
PolymersNumber of chains36
Total formula weight701040.4
Non-Polymers*Number of molecules48
Total formula weight2153.1
All*Total formula weight703193.6
*Water molecules are not included.

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PDB entries from 2024-06-19

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