2YPD
Crystal structure of the Jumonji domain of human Jumonji domain containing 1C protein
Entity
| Entity ID | Chain ID | Description | Type | Chain length | Formula weight | Number of molecules | DB Name (Accession) | Biological source | Descriptive keywords |
| 1 | A, B | PROBABLE JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROT EIN 2C | polymer | 392 | 45190.6 | 2 | UniProt (Q15652) Pfam (PF02373) In PDB | HOMO SAPIENS (HUMAN) | JUMONJI DOMAIN-CONTAINING PROTEIN 1C, THYROID RECEPTOR-INTERACTING PROTEIN 8, TR-INTERACTING PROTEIN 8, TRIP-8 |
| 2 | A, B | 2-(ETHYLMERCURI-THIO)-BENZOIC ACID | non-polymer | 382.8 | 11 | Chemie (EMT) | |||
| 3 | A, B | SODIUM ION | non-polymer | 23.0 | 2 | Chemie (NA) | |||
| 4 | water | water | 18.0 | 223 | Chemie (HOH) |
Sequence modifications
A, B: 2157 - 2540 (UniProt: Q15652)
| PDB | External Database | Details |
|---|---|---|
| Met 0 | - | expression tag |
| Ala 2541 | - | expression tag |
| Glu 2542 | - | expression tag |
| Asn 2543 | - | expression tag |
| Leu 2544 | - | expression tag |
| Tyr 2545 | - | expression tag |
| Phe 2546 | - | expression tag |
| Gln 2547 | - | expression tag |
Sequence viewer
Contents of the asymmetric unit
| Polymers | Number of chains | 2 |
| Total formula weight | 90381.2 | |
| Non-Polymers* | Number of molecules | 13 |
| Total formula weight | 4257.1 | |
| All* | Total formula weight | 94638.3 |
