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2YPD

Crystal structure of the Jumonji domain of human Jumonji domain containing 1C protein

Functional Information from GO Data
ChainGOidnamespacecontents
A0032454molecular_functionhistone H3K9 demethylase activity
B0032454molecular_functionhistone H3K9 demethylase activity
Functional Information from PDB Data
site_idAC1
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EMT A 3498
ChainResidue
ACYS2163
AHIS2166
AARG2446
ATHR2447
ACYS2448
AEMT3499

site_idAC2
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EMT A 3499
ChainResidue
AARG2446
ACYS2448
AEMT3498
AHOH2096
AHIS2166
AILE2393

site_idAC3
Number of Residues3
DetailsBINDING SITE FOR RESIDUE EMT A 3500
ChainResidue
AGLU2184
ACYS2185
AGLN2188

site_idAC4
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EMT B 3498
ChainResidue
BHIS2166
BILE2393
BARG2446
BCYS2448
BEMT3499

site_idAC5
Number of Residues6
DetailsBINDING SITE FOR RESIDUE EMT B 3499
ChainResidue
BCYS2163
BHIS2166
BARG2446
BTHR2447
BCYS2448
BEMT3498

site_idAC6
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EMT B 3500
ChainResidue
BGLU2184
BCYS2185
BGLN2188
BGLN2190

site_idAC7
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EMT A 3501
ChainResidue
ACYS2225
ALYS2260
AGLY2331
ATHR2332
AASN2334

site_idAC8
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EMT A 3502
ChainResidue
AHOH2071
ALYS2260
AASP2263
ACYS2317
AEMT3503

site_idAC9
Number of Residues5
DetailsBINDING SITE FOR RESIDUE EMT B 3501
ChainResidue
BASP2263
BARG2315
BCYS2317
BGLN2476
BTHR2478

site_idBC1
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EMT B 3502
ChainResidue
BCYS2317
BTHR2333
BASN2344
BGLN2476

site_idBC2
Number of Residues4
DetailsBINDING SITE FOR RESIDUE EMT A 3503
ChainResidue
ACYS2317
ATHR2333
AGLN2476
AEMT3502

site_idBC3
Number of Residues4
DetailsBINDING SITE FOR RESIDUE NA B 3503
ChainResidue
BMET2274
BPRO2275
BALA2276
BARG2277

site_idBC4
Number of Residues3
DetailsBINDING SITE FOR RESIDUE NA A 3504
ChainResidue
AMET2274
AALA2276
AARG2277

Functional Information from SwissProt/UniProt
site_idSWS_FT_FI1
Number of Residues6
DetailsBINDING: BINDING => ECO:0000255|PROSITE-ProRule:PRU00538
ChainResidueDetails
AHIS2336
AGLU2338
AHIS2466
BHIS2336
BGLU2338
BHIS2466

218500

PDB entries from 2024-04-17

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